Pairwise Alignments

Query, 417 a.a., porin-like protein from Pseudomonas putida KT2440

Subject, 429 a.a., tricarboxylate-specific outer membrane porin from Pseudomonas putida KT2440

 Score =  343 bits (879), Expect = 7e-99
 Identities = 183/411 (44%), Positives = 258/411 (62%), Gaps = 10/411 (2%)

Query: 14  AVSLAFGLGLPAWAQEGGFLEDAKGGLTLRNYYFNRDFRD-PGAAKGKVEEWAQGFIFKF 72
           A++ A  L   A   +  F ED+      RN YFNRDFRD   A + K +EWAQGFI  F
Sbjct: 21  AIASALALAGVAPMSQAAFFEDSTATFETRNMYFNRDFRDGTSAQQSKRDEWAQGFILNF 80

Query: 73  SSGYTPGLIGFGLDGIALFGVKLDSGGGTSGSELLPVHDDGRAADDYGRAGLAAKLRMSA 132
            SGYT G +GFGLD + + G+KLDS    + S LLP HDDG+AAD+Y + GL  K+++S 
Sbjct: 81  ESGYTDGTVGFGLDALGMLGIKLDSSPDRTDSGLLPTHDDGKAADEYSKLGLTGKVKISQ 140

Query: 133 TELKVGELLPDIPLLRYDDGRLLPQTFRGAMLDSREIEGLSLQAGQYREVSLRHSSDMQD 192
           TELK+G L+P++P L+ +DGR+LPQTF G +L S+EI+GL+   G+  +   R+ ++ +D
Sbjct: 141 TELKIGTLIPELPTLQPNDGRILPQTFEGGLLTSKEIKGLTFTGGRIDKAKDRNDTNWED 200

Query: 193 LSAWAAPG-----VTSDGFNYAGAEYRFNQQRTLIGAWH-SQLEDIYQQSYFNLLHSQRV 246
           L+     G      ++D     G +Y+F  + T  G++H +QL+DIY+Q +  ++ +Q  
Sbjct: 201 LALNNKNGRFGGTFSADNLALGGLDYQFTDRIT--GSYHFAQLDDIYRQHFIGMVATQPW 258

Query: 247 GEWTLGANLGYFIDRDDGQARIGDIQSRTGYALLSASHSGHTLYLGLQKVSGDSQWMSVY 306
           G  TLGA+L   +  D G A+ G+I + T   +LS +  GH +    Q++SG+S +  V 
Sbjct: 259 GPGTLGADLRLAMSDDAGAAKAGNIDNTTVNGMLSYALGGHKVSAAWQQLSGESAFPYVD 318

Query: 307 GSSGRTLGNDMFNGNFSNADERSWQVRYDYNFAALGVPGLLAMVRYGHGENATTAAGSNG 366
           G+    +     N +F+ ADERSWQ RYDYNFAALGVPGL  M RY  G+N + AAG  G
Sbjct: 319 GADPYLVNFVQIN-DFAGADERSWQARYDYNFAALGVPGLTFMTRYISGDNVSRAAGGEG 377

Query: 367 KEWERDAEVNYTFQSGALKNLNIRLNNATNRRSFNSDLDQTRLIVSYPLTL 417
           KEWER+ E+ Y  QSG LKN+ +RL NAT R +F  D D+ RL+VSY + L
Sbjct: 378 KEWERNTELKYVVQSGPLKNVAVRLRNATFRSNFARDADEVRLLVSYSVAL 428