Pairwise Alignments

Query, 417 a.a., porin-like protein from Pseudomonas putida KT2440

Subject, 444 a.a., histidine-specific outer membrane porin D from Pseudomonas putida KT2440

 Score =  233 bits (593), Expect = 1e-65
 Identities = 150/437 (34%), Positives = 227/437 (51%), Gaps = 35/437 (8%)

Query: 13  LAVSLAFGLGLPAWAQEG---GFLEDAKGGLTLRNYYFNRDFRDPGAAKGKVEEWAQGFI 69
           L ++L   +   A A E    GF+E +   L  RN YFNRD  + G    +  EW QG +
Sbjct: 10  LFIALTATIPFAAQADEDKADGFIEGSSFNLHFRNAYFNRDNHNAGVRDTR--EWGQGAV 67

Query: 70  FKFSSGYTPGLIGFGLDGIALFGVKLDSGGGTSGSELLPVH--DDGR---AADDYGRAGL 124
            +F SGYTPG++GFGLD  A+ G+KLD GGG +G+ +LP H  DDG    A   +  AG 
Sbjct: 68  ARFESGYTPGVVGFGLDAHAMLGLKLDGGGGHAGTSILPEHIKDDGELGAAPHSFSTAGA 127

Query: 125 AAKLRMSATELKVGELLPDIPLLRYDDGRLLPQTFRGAMLDSREIEGLSLQAGQYREVSL 184
           A KL+   TELK G+L    P++   + R+LPQTFRG  L +  I+GL L+ GQ      
Sbjct: 128 AVKLKAFDTELKAGDLFLTNPVIAGGETRMLPQTFRGVSLTNTSIDGLLLEGGQVSFTHP 187

Query: 185 RHSSDMQDLSAWAA---PGVTSDGFNYAGAEYRFNQQRTLIGAWHSQLEDIYQQSYFNLL 241
            + S  + +  +         S   N+AGA +   +  T    + ++L+DI+ Q Y +  
Sbjct: 188 YNQSGHRRIDTYYGSLDEHDKSKHLNWAGASWSGTEHIT-ANLYAAELKDIWNQYYADFD 246

Query: 242 HSQRVGEW-TLGANLGYFIDRDDGQARIGDIQSRTGYALLSASHSGHTLYLGLQKVSGDS 300
           ++  V +  +L   + ++  +D GQA +G I + T     + +   H++    Q+V+G++
Sbjct: 247 YTYVVNDLVSLNPGVHFYHTQDTGQALLGKIDNNTYSVHFTVNAGFHSVTAAYQRVNGNT 306

Query: 301 QWMSVYGSSGRTLGNDMFNGNFSNADERSWQVRYDYNFAALGVPGLLAMVRYGHGENATT 360
            +  +       L N     +F+  +ERSW+++Y Y+FA +GVPGL   + Y  GE   T
Sbjct: 307 PFDYINLGDSVYLDNSRMYSDFNAPNERSWKLQYGYDFAGVGVPGLSTSLSYSRGEADLT 366

Query: 361 AA-------------GSNGKEWERDAEVNYTFQSGALKNLNIRLNNATNRRS-------F 400
            A             G N   WERD +V Y FQ G LK+L++ +  AT+R S        
Sbjct: 367 KATQDTTHYDYYREDGKNAMHWERDLDVKYVFQEGDLKDLSVLVRYATHRGSQGYASIDS 426

Query: 401 NSDLDQTRLIVSYPLTL 417
           NSD D+ R+IV YPL +
Sbjct: 427 NSDNDELRVIVDYPLNV 443