Pairwise Alignments

Query, 417 a.a., porin-like protein from Pseudomonas putida KT2440

Subject, 444 a.a., outer-membrane porin E from Pseudomonas putida KT2440

 Score =  229 bits (583), Expect = 2e-64
 Identities = 161/443 (36%), Positives = 227/443 (51%), Gaps = 45/443 (10%)

Query: 10  RSVLAVSLAFGLGLPAWAQEGGFLEDAKGGLTLRNYYFNRDFRDPGAAKGKVEEWAQGFI 69
           +S LA+++A G+ L   A   GF+ED+K  L+ R  YFN D R+ G  +   +E  QGF 
Sbjct: 3   KSSLALAVALGV-LAQQAGAAGFVEDSKLSLSSRTMYFNDDNRESGIDQ---KESGQGFK 58

Query: 70  FKFSSGYTPGLIGFGLDGIALFGVKLDSGGGT---SGSELLPVHDDGRAADDYGRAGLAA 126
             + SG+T G +GFG+D  AL+G+ LD G G+   + +   P   DG A  D+ R G  A
Sbjct: 59  LDYLSGFTQGTVGFGVDVQALWGIHLDGGRGSRPDANNTFFPSDSDGSAVHDWARIGGNA 118

Query: 127 KLRMSATELKVGELL-PDIPLLRYDDGRLLPQTFRGAMLDSREIEGLSLQAGQYREVSLR 185
           K R S TE+  G  L P +P+L  +DGRLLPQTF G  L S+EI+ L++ AGQ      R
Sbjct: 119 KARFSKTEVHYGSALAPMLPILVSNDGRLLPQTFEGGTLQSKEIDNLTINAGQLTHAMGR 178

Query: 186 HSSDMQDLSAWAAPGVTSDGFNYAGAEYRFNQQRTLIGAWHSQLEDIYQQSYFNLLHSQR 245
            SS+   LS   A    S+ F +AG +Y+     TL   ++S LED Y+Q +    H  +
Sbjct: 179 ASSNRTGLSVSGA-FRDSNKFQFAGGDYKLTPDLTL-QYYYSNLEDFYKQHFLGATHVFK 236

Query: 246 VGE-WTLGANLGYFIDRDDGQ---------------ARIGDIQSRTGYALLSASHSGHTL 289
           + +  +   +L YF    DG+                  G++ ++T  A+ + +  GH L
Sbjct: 237 IADNQSFKTDLRYFDSSSDGKNGQTGYAFDNNGGYAKNSGEVDNKTWSAMFTYTLGGHAL 296

Query: 290 YLGLQKVSGDSQWM--------------SVYGSSGRT--LGNDMFNGNFSNADERSWQVR 333
            LG Q+V  D  ++              S+ G+ G +  L  D     F+ A E +   +
Sbjct: 297 MLGHQQVGDDGGFVWLNQGSVRKDGSTSSLEGNGGASFYLFTDSMINQFARAGENTTFGQ 356

Query: 334 YDYNFAALGVPGLLAMVRYGHGENATTAAGSNG-KEWERDAEVNYTFQSGALKNLNIRLN 392
           Y Y+FAALGVPGL A V Y  G++    +G     EWERDA V+YT Q G LK L   L 
Sbjct: 357 YSYDFAALGVPGLKASVSYLRGDDVRNRSGDGTYNEWERDARVDYTLQEGTLKGLGFSLR 416

Query: 393 NATNRRSFNS--DLDQTRLIVSY 413
               R S  S  D DQTR IV+Y
Sbjct: 417 QGVYRGSGESALDKDQTRFIVNY 439