Pairwise Alignments

Query, 417 a.a., porin-like protein from Pseudomonas putida KT2440

Subject, 447 a.a., tyrosine-specific outer membrane porin D from Pseudomonas putida KT2440

 Score =  262 bits (670), Expect = 1e-74
 Identities = 155/438 (35%), Positives = 237/438 (54%), Gaps = 33/438 (7%)

Query: 11  SVLAVSLAFGLGLPAWAQEGGFLEDAKGGLTLRNYYFNRDFRDP---------GAAKGKV 61
           +V A+S ++ +   A  +  GF+E +   +  RN+YFNRD RD          G   G  
Sbjct: 11  AVSALSGSYAISAQAEDKPEGFIEGSSLTVLNRNFYFNRDNRDSTAPTYNSGKGNTNGYS 70

Query: 62  EEWAQGFIFKFSSGYTPGLIGFGLDGIALFGVKLDSG----GGTSGSELLPVHDDGRAAD 117
           E WA   I KF+SG+T G +GFG+D  A+ G+KLD+G    GG S  ++LPV + G A D
Sbjct: 71  EAWAHAIISKFNSGFTQGTVGFGVDAFAMIGLKLDTGDGRNGGRSSFDVLPVDNKGEARD 130

Query: 118 DYGRAGLAAKLRMSATELKVGELLPDIPLLRYDDGRLLPQTFRGAMLDSREIEGLSLQAG 177
           +Y + G AAK+R+  T +KVG++ P  P++   D RLLP++FRG  +++  I+GL+LQ G
Sbjct: 131 EYTKVGGAAKVRLFDTIVKVGDVFPSTPVVASGDSRLLPESFRGVTVENTSIQGLTLQGG 190

Query: 178 QYREVSLRHSSDMQD--LSAWAAPGVTSDGFNYAGAEYRFNQQRTLIGAWHSQLEDIYQQ 235
           +   +S   SS++ D  ++ +  P V S    Y G +Y  N   T +  + SQL+D++ Q
Sbjct: 191 RLHAMSQPVSSNLNDNFVTFYGGP-VNSPWIGYGGGDYSINDNWT-VSVYASQLKDVWNQ 248

Query: 236 SYFNLLHSQRVG-EWTLGANLGYFIDRDDGQARIGDIQSRTGYALLSASHSGHTLYLGLQ 294
            Y        +  +  L     Y+   D+G+ R+G+  +    A +   +  HTL L  Q
Sbjct: 249 YYAGTSVVYPLSDDLALIGGFNYYKAVDEGKKRLGEFDNNIWSAKVGVRYGAHTLALSHQ 308

Query: 295 KVSGDSQWMSVYGSSGRTLGNDMFNGNFSNADERSWQVRYDYNFAALGVPGLLAMVRYGH 354
           + +GD  +  +  S    + N +   +F++  ERSW +RYD NF + G+PGL  M RY  
Sbjct: 309 RNNGDDDFDYLRQSDSIFVDNSIQYSDFNSPKERSWMLRYDLNFTSYGIPGLTFMTRYAR 368

Query: 355 GENATTAAGS--------------NGKEWERDAEVNYTFQSGALKNLNIRLNNATNR-RS 399
           G  A  +  +              N K WERD EV Y  Q+G  K+L+ RL  AT R  +
Sbjct: 369 GSGADYSNANQFYMRTDDNGNPLDNQKRWERDVEVKYVVQTGPAKDLSFRLRQATTRATA 428

Query: 400 FNSDLDQTRLIVSYPLTL 417
           F SDLD+TR+I+ YPL++
Sbjct: 429 FESDLDETRVIIEYPLSI 446