Pairwise Alignments

Query, 355 a.a., vanillate O-demethylase oxygenase subunit from Pseudomonas putida KT2440

Subject, 341 a.a., Rieske 2Fe-2S family protein from Pseudomonas putida KT2440

 Score = 70.5 bits (171), Expect = 6e-17
 Identities = 81/342 (23%), Positives = 135/342 (39%), Gaps = 44/342 (12%)

Query: 7   WYVACTPDEIATKPLGRQICGEKIVFYRARENQVAAVEDFCPHRGAPLSLGYVE-DGNLV 65
           WY       +   P    + GE +V ++  +    A+ D C HR A LS G+V  +GN+ 
Sbjct: 13  WYALLPMTALEDGPKPFTLLGEALVLWKRPDGTPVAMRDRCCHRTAKLSKGFVSAEGNIA 72

Query: 66  CGYHGLVMGCDGKTVSMPGQRVRGFP---CNKTFAAVERYGFIWVWPGDQAQADPALIPH 122
           CGYHG    C G  V +P       P     K +   E+YG+ WV   D  Q  P     
Sbjct: 73  CGYHGWEYDCTGTCVKIPQSPTGAIPPGAAVKAYHCQEKYGYAWVSLDDPLQPIPEF--- 129

Query: 123 LEWAVSDEWAYG-GGLFHIGCDYRL----MIDNLMDLTHETYVHASSIGQKEIDEAPPVT 177
                 ++ A G   +F    +++     +++N  D +H ++VH ++ G    D+  P +
Sbjct: 130 -----PEDGAPGYRRIFQFYEEWKTSPLRVMENSFDNSHFSFVHKANFGL--FDQPQPAS 182

Query: 178 -----TVTGDEVVTARHMENIMAPPFWRMALRGNGLADDVPVDRWQICRFTPPSHVLIEV 232
                T  G E  T   + N  A      + R  G  + +   R  + R+  P       
Sbjct: 183 YEFRETDYGFEAETRVPIRNPEA------SFRITGTTEPI-TQRHLLNRYYLP--FSRRF 233

Query: 233 GVAHAGKGGYHAEAQHKASSIVVDFITPESDTSIWYFWGMARNFAAHDQTLTDNIREGQG 292
           G  +   G +H         I+ +  TP  D  +     + RN  + +Q  T  + +   
Sbjct: 234 GCMYPDSGIHH---------IIYNCATPIDDNRLMLVQWLYRN-DSEEQCSTQELIDWDA 283

Query: 293 KIFSEDLEMLERQQQNLLAHPERNL-LKLNIDAGGVQSRKVL 333
            I +ED ++LE    +      R + L +  D  G+  R+ L
Sbjct: 284 AITAEDRDILEATDPDACVDTRRRVELHMPSDKPGLVIRRQL 325