Pairwise Alignments

Query, 352 a.a., putative ABC transporter lipoprotein from Pseudomonas putida KT2440

Subject, 355 a.a., hypothetical protein from Agrobacterium fabrum C58

 Score =  366 bits (940), Expect = e-106
 Identities = 181/351 (51%), Positives = 225/351 (64%), Gaps = 13/351 (3%)

Query: 12  LLLCGCDQPAP-----QSYAGLGQQAGEFSQVTRDHRLVFPHDHGPHDGFRIEWWYVTAN 66
           LLLC      P     Q +AGLG  A  FS  TR   LVFP DH PH GF+IEWWYVTAN
Sbjct: 8   LLLCASCTSLPTPVMGQGFAGLGSNAEGFSIPTRGVELVFPKDHKPHPGFKIEWWYVTAN 67

Query: 67  LKDAQGRDWGAQWTLFRSALRPGPETSGWNSPNLWMGHAALTAPGGHQAAETLARGGIGQ 126
           L+ A G+  G QWTLFRSAL P  E  GW+ P +W+GHAA+T    H  AE LARGG+GQ
Sbjct: 68  LQTADGQRMGVQWTLFRSALEP-VERPGWSDPQIWIGHAAVTTASRHHVAERLARGGVGQ 126

Query: 127 AGVQAQPFRAWINDWVLQG-----QGGIEQLQMVASGDGFRYDLQLHSDLPLVLHGEQGY 181
           AGV+ +PF AWI++W ++      +  ++Q+ + A+G+ FRY L+L +  PLV  G+ GY
Sbjct: 127 AGVKGEPFDAWIDNWQMKAGTDDARDDLDQIDLNANGESFRYRLKLQAHGPLVRQGDNGY 186

Query: 182 SEKSGKGQASYYYSQPFYQVQGQVQRGSLCIAVTGQAWLDREWSSQPLAPGQTGWDWFSL 241
           S KS +GQASYYYSQPFY V G V        VTG+AWLDREWSSQPLA  QTGWDWFSL
Sbjct: 187 SVKSAEGQASYYYSQPFYSVSGSVFLDGETHEVTGEAWLDREWSSQPLASSQTGWDWFSL 246

Query: 242 HLDSGAKLMLFQVREAHGEPYRAGTWVGPQGDVVALDAAQIKLQALAWSAQKNGKQVPTR 301
           HL SG KLM F++R+     Y +  W+   G    +D   + L  L  +A  NGK VP  
Sbjct: 247 HLASGEKLMAFRLRD-DKSGYISANWISADGRASPVDPDDVLLSPLR-TADINGKSVPVE 304

Query: 302 WRVQVPEHGVDVQVDAVEPQAWMQTRFPYWEGPVRLKGSAGGRGYLEMTGY 352
           W V++P  G+D++   +  +AWM T  PYWEGP+   GS  G+GYLEMTGY
Sbjct: 305 WSVKIPSRGLDIKTKPLNEKAWMATSTPYWEGPIEFDGSTSGQGYLEMTGY 355