Pairwise Alignments

Query, 260 a.a., Periplasmic amino acid-binding protein-related protein from Pseudomonas putida KT2440

Subject, 245 a.a., amino acid ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

 Score = 64.7 bits (156), Expect = 2e-15
 Identities = 59/207 (28%), Positives = 94/207 (45%), Gaps = 16/207 (7%)

Query: 46  GLAPTVVRELFARMGYEVQTVVLGNWKRCLMDAAAGRVDVVL-AYNSDQRDQRMRFSTEP 104
           GLA  +V    AR GY      +  W R LM    GR DV++ A+  D R Q  +FS E 
Sbjct: 44  GLATDIVSTALARAGYASDFEQVP-WARALMGVGDGRYDVLVNAWYDDARTQLGQFSGEY 102

Query: 105 VMREEVAVFYNRKRPVQFQQLEDLAGYRGGLLYGESYGAEFDRFVARHQNIERVSSSQQN 164
           ++   V     R  P++FQ LE L  Y   ++ G +Y A FD        +++V     N
Sbjct: 103 LLNR-VRFIKRRDDPIEFQNLEQLHDYPIAVVRGYAYSAAFD----GDAQLQKV--PVHN 155

Query: 165 FGKLIR----GRIDYVIQERRTGLLFI--EHLPGAQDIRALPTALSVDYLRVAVSRQSP- 217
           F   +R     R+   +++      ++  E       +  LP  LS + L + VS ++P 
Sbjct: 156 FAMAVRMLAAQRVRLTVEDEYVARYYLSRESTRVRNTVEFLPKPLSENSLHILVSLKNPE 215

Query: 218 LSQHMAEIDAQLQRMNQAGEIARWLEQ 244
            +Q +A  D ++ +M   G  AR ++Q
Sbjct: 216 HAQIVASFDREIAKMKADGSYARLMKQ 242