Pairwise Alignments

Query, 260 a.a., Periplasmic amino acid-binding protein-related protein from Pseudomonas putida KT2440

Subject, 262 a.a., amino acid ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

 Score = 43.5 bits (101), Expect = 4e-09
 Identities = 53/190 (27%), Positives = 79/190 (41%), Gaps = 19/190 (10%)

Query: 6   WQLALALTLPTL------HASASEPVRY--CDYPVYP--PISWSDGHQVRGLAPTVVREL 55
           W+LA  LT   L       ASA++ VR     +P Y   P   +D     GL P +V  L
Sbjct: 5   WRLAAGLTFWALGTAWWGQASAAQLVRIGAAHFPPYTVRPEQGAD----TGLLPQLVEAL 60

Query: 56  FARMGYEVQTVVLGNWKRCLMDAAAGRVDVVLAYNSDQRDQRMRFSTEPVMREEVAVFYN 115
            A        +V  +  R   D   GRVD+ +  N D   Q++  +T  +  E+  +F  
Sbjct: 61  NASQTDYQFVLVPTSIPRRFRDFEQGRVDMAIFENPDWGWQKIPHTTVDMGLEDAEIFVA 120

Query: 116 RKRPVQFQQ-LEDLAGYRGGLLYGESYG-AEFD---RFVARHQNIERVSSSQQNFGKLIR 170
           ++   + Q    DL G R  +  G  Y  A F+   +++A H N     S   N   + R
Sbjct: 121 QREAGRDQSYFADLKGKRLAVFSGYHYAFANFNPDPKYMAEHFNATLTYSHDSNLLMVAR 180

Query: 171 GRIDYVIQER 180
           GR D  +  R
Sbjct: 181 GRADIALVTR 190