Pairwise Alignments

Query, 260 a.a., Periplasmic amino acid-binding protein-related protein from Pseudomonas putida KT2440

Subject, 251 a.a., hypothetical protein from Pseudomonas sp. S08-1

 Score = 66.2 bits (160), Expect = 6e-16
 Identities = 58/245 (23%), Positives = 115/245 (46%), Gaps = 12/245 (4%)

Query: 4   RAWQLALALTLPTLHASASEPVRYCDYPVYPPISWSDGHQVRGLAPTVVRELFARMGYEV 63
           R   L LAL +P   A+ ++ VR  +    P +  +  H   G+A  +V E FA  G +V
Sbjct: 2   RLLPLLLALLMPL--AATADEVRLTNGEWSPYLGQNLPHH--GVASRIVEEAFALEGVKV 57

Query: 64  QTVVLGNWKRCLMDAAAGRVDVVLAYNSDQRDQRMRFSTEPVMREEVAVFYNRKRPVQFQ 123
           +      W R L  A  G  +    +      ++  F ++PV+     +F+ + +P++++
Sbjct: 58  KWEFYP-WARALRSAERGNSEGSAVWLRSPEREQAFFISDPVVESGYYLFHRKDQPIEWR 116

Query: 124 QLEDLAGYRGGLLYGESYGAEFDRFVARHQ-NIERVSSSQQNFGKLIRGRIDYVIQERRT 182
           ++ DL   R G      YG  F +     Q  ++R+S+ +Q    L+ GR+D    ++  
Sbjct: 117 EVADLKSLRIGGAIDYDYGQAFQQAERDGQLKVKRLSNEEQGLRMLLAGRLDVFPMDKVV 176

Query: 183 GLLFIEHLPGAQDIRAL----PTALSVDYLRVAVSRQSP-LSQHMAEIDAQLQRMNQAGE 237
               + H   +++ R+     P  L  D L + +S++ P   Q MA+ +  L+ +  +G+
Sbjct: 177 AFDLL-HSQFSREARSQLSFHPQPLRSDSLHLLLSKKVPGNEQRMAQFNRGLKALQDSGK 235

Query: 238 IARWL 242
           ++++L
Sbjct: 236 VSQYL 240