Pairwise Alignments

Query, 367 a.a., Putrescine-binding periplasmic protein from Pseudomonas putida KT2440

Subject, 363 a.a., ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

 Score =  288 bits (737), Expect = 2e-82
 Identities = 149/357 (41%), Positives = 220/357 (61%), Gaps = 8/357 (2%)

Query: 18  SLAQAAEVGSG------NTLRLYNWTDYIGETTLADFEKATG-IKVIYDTFDGYETVQTK 70
           SL   A V SG       TLR+YNW DYI    L DF+     IK++YD FD  E ++ K
Sbjct: 6   SLVLCAAVISGMAHAEEKTLRVYNWFDYITPKALEDFKAQNPTIKLVYDIFDTNEALEAK 65

Query: 71  LLTGRSGYDLVMLNASLVPPLISAGVFQALDKQQLPSWHNLDQQVVNDLQGYDPGLKYSA 130
           LLTG +GYD+V+ +   +   I AGVFQ LD+ QL +W +LD +++  ++  DPG K++ 
Sbjct: 66  LLTGNAGYDVVVPSNVFLAKQIEAGVFQPLDRSQLQNWKHLDPKLMKLIEANDPGNKFAV 125

Query: 131 PYTWGSSGVTYNVDKITARMP-DAPIGSLAMLFDPKIVSRFADCGVTLMDAPTEVIPLAL 189
           PY +G+  + +N DK+ A +  +AP+ S  ++F  + +S+   CGV L+D+P+E++PLAL
Sbjct: 126 PYMYGTILIGFNPDKVKAALGVNAPVDSWDLIFKEENISKLKQCGVALLDSPSEILPLAL 185

Query: 190 QYLGKDPRSASPADLKAAEQLLLGIRPYIRKFDSVNYLTSLPNGDVCLALTWSGDYATAQ 249
           Q+LG DP S++P D   AE LLL IRPY+  F S  Y+  + NGD+C+A+ +SG ++ A 
Sbjct: 186 QHLGLDPNSSNPKDYAKAEALLLKIRPYVTYFHSSKYMADIANGDICVAVGYSGSFSQAA 245

Query: 250 ARAVEAKKDIKLSFFIPREGSLIWFDNLYIPKDAPHAANAHRFIEFLLQPQTMAKVTDYI 309
            RA +AK  + +   +P+EG+ IWFD L IPK A +  +A+ FI +LLQPQ +A ++D++
Sbjct: 246 NRARDAKNGVTVDMRLPKEGAPIWFDMLAIPKGAKNPQDAYTFINYLLQPQVIAPISDFV 305

Query: 310 HYANSNAAATALVRDDIRQDPAIYPDAPTRERLFAQKTQSPRDMRAITRVWSTVKTG 366
            Y N N  AT  V   IR +P +YP       L+  K       RA TR WS +K+G
Sbjct: 306 GYPNPNKDATEQVDPSIRNNPNLYPTEAAMATLYTLKPLGRDAERARTRAWSKIKSG 362