Pairwise Alignments

Query, 367 a.a., Putrescine-binding periplasmic protein from Pseudomonas putida KT2440

Subject, 359 a.a., spermidine/putrescine ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

 Score =  313 bits (802), Expect = 5e-90
 Identities = 156/363 (42%), Positives = 225/363 (61%), Gaps = 6/363 (1%)

Query: 5   LKVIGGLLLASGASLAQAAEVGSGNTLRLYNWTDYIGETTLADFEKATGIKVIYDTFDGY 64
           +K I  L L   AS+ QAAE     T+++YNW+DYI   T  +F+K TGI   YD +D  
Sbjct: 1   MKAIALLPLMLVASIGQAAE-----TVKIYNWSDYIAPDTTKNFQKETGIGFTYDVYDSN 55

Query: 65  ETVQTKLLTGRSGYDLVMLNASLVPPLISAGVFQALDKQQLPSWHNLDQQVVNDLQGYDP 124
           ET+  KL+TG+SGYD+V  +   +   I  G  + LDK QLP+W NL+  ++  L+  DP
Sbjct: 56  ETLDGKLMTGKSGYDVVFPSNHFMARQIQGGALKKLDKSQLPNWKNLNPVLLKALENNDP 115

Query: 125 GLKYSAPYTWGSSGVTYNVDKITARMPD-APIGSLAMLFDPKIVSRFADCGVTLMDAPTE 183
           G  +  PY WGS+G+ YN+DK+ A + D AP+ S  ++F P+ +++   CGV ++D   E
Sbjct: 116 GNAHGFPYLWGSTGIGYNIDKVKAVLGDNAPVDSWDLIFKPENMAKLQKCGVAILDNGPE 175

Query: 184 VIPLALQYLGKDPRSASPADLKAAEQLLLGIRPYIRKFDSVNYLTSLPNGDVCLALTWSG 243
           ++P AL YLG    S  P D K AE LL+ +RPY+  F S  Y   L NGD+C+A+ +SG
Sbjct: 176 LLPAALNYLGLPHHSKKPEDYKKAEDLLMKVRPYVAYFHSSKYTADLANGDICVAVGFSG 235

Query: 244 DYATAQARAVEAKKDIKLSFFIPREGSLIWFDNLYIPKDAPHAANAHRFIEFLLQPQTMA 303
           D   A++RA EAK  + + + IP+EG+ IWFD + +P DAP+ A  + F+ +LL+PQ MA
Sbjct: 236 DILQAESRAKEAKNGVNIGYNIPKEGAAIWFDMVAMPADAPNEAAGYAFMNYLLRPQVMA 295

Query: 304 KVTDYIHYANSNAAATALVRDDIRQDPAIYPDAPTRERLFAQKTQSPRDMRAITRVWSTV 363
            +T+Y+HYAN N AA +LV   I+ D  IYP      +LFA +       R  TRVW+T+
Sbjct: 296 SITNYVHYANGNQAADSLVDPAIKADTKIYPSPEMMGKLFALEAMPLNIDRVRTRVWNTI 355

Query: 364 KTG 366
           +TG
Sbjct: 356 RTG 358