Pairwise Alignments

Query, 367 a.a., Putrescine-binding periplasmic protein from Pseudomonas putida KT2440

Subject, 362 a.a., ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

 Score =  332 bits (850), Expect = 1e-95
 Identities = 167/365 (45%), Positives = 235/365 (64%), Gaps = 5/365 (1%)

Query: 1   MRKVLKVIGGLLLASGASLAQAAEVGSGNTLRLYNWTDYIGETTLADFEKATGIKVIYDT 60
           MR V ++    L+A+ +S +QAA      T+ +YNWTDYIGETTLADF+  TGIK IYD 
Sbjct: 1   MRLVKQLFPLALVAAFSSASQAAP-----TVSVYNWTDYIGETTLADFQAKTGIKPIYDV 55

Query: 61  FDGYETVQTKLLTGRSGYDLVMLNASLVPPLISAGVFQALDKQQLPSWHNLDQQVVNDLQ 120
           FD  ET++ KLL GR+GYD+V+ +   +   + AG F  LD+ QLP++ NLD +++  L+
Sbjct: 56  FDSNETLEGKLLAGRTGYDVVVPSNHFLARQVKAGAFLKLDRAQLPNFKNLDPKLLKLLE 115

Query: 121 GYDPGLKYSAPYTWGSSGVTYNVDKITARMPDAPIGSLAMLFDPKIVSRFADCGVTLMDA 180
             DPG  +S PY WG++G+ YNVDK+   +    I S A+LF+P+ + +   CGV  +D+
Sbjct: 116 KNDPGNAHSVPYLWGTNGIGYNVDKVKEVLGIDAIDSWAVLFEPENIKKLNQCGVAFLDS 175

Query: 181 PTEVIPLALQYLGKDPRSASPADLKAAEQLLLGIRPYIRKFDSVNYLTSLPNGDVCLALT 240
             E+ P  L Y+GKDPRS +P D K AE  LL +RPYI  F S  Y++ L NG++C+A  
Sbjct: 176 ADELFPAILNYMGKDPRSENPEDYKQAEAKLLTLRPYITYFHSSKYISDLANGNICVAFG 235

Query: 241 WSGDYATAQARAVEAKKDIKLSFFIPREGSLIWFDNLYIPKDAPHAANAHRFIEFLLQPQ 300
           +SGD   A  RA EAK  +K+++ IP+EGS +WFD L IP DA H   AH FI +LL PQ
Sbjct: 236 YSGDVFQAANRAKEAKNGVKIAYSIPKEGSNLWFDLLAIPADASHPKEAHAFINYLLDPQ 295

Query: 301 TMAKVTDYIHYANSNAAATALVRDDIRQDPAIYPDAPTRERLFAQKTQSPRDMRAITRVW 360
            +AKV+  + YAN+N AA A +  ++  +P +YP     ++L+   T +P  MR +TR W
Sbjct: 296 VIAKVSASVGYANANPAAKAFMDPELVNNPEVYPSQDVLDKLYISTTPTPATMRLMTRAW 355

Query: 361 STVKT 365
           S VKT
Sbjct: 356 SKVKT 360