Pairwise Alignments

Query, 367 a.a., Putrescine-binding periplasmic protein from Pseudomonas putida KT2440

Subject, 359 a.a., putrescine-binding periplasmic protein from Pseudomonas putida KT2440

 Score =  283 bits (725), Expect = 4e-81
 Identities = 140/361 (38%), Positives = 221/361 (61%), Gaps = 8/361 (2%)

Query: 7   VIGGLLLASGASLAQAAEVGSGNTLRLYNWTDYIGETTLADFEKATGIKVIYDTFDGYET 66
           ++  L+LA  AS+A AAE     T+++YNW+ Y+   TL +F++A+GI   YD +D  ET
Sbjct: 5   LLAPLMLA--ASVASAAE-----TVKIYNWSSYVAPDTLKNFQQASGIVPTYDVYDSNET 57

Query: 67  VQTKLLTGRSGYDLVMLNASLVPPLISAGVFQALDKQQLPSWHNLDQQVVNDLQGYDPGL 126
           +  KL+TG SGYD+V  +   +   I     + LDK +LP+WHNL+  ++  L+  DPG 
Sbjct: 58  LDGKLMTGNSGYDVVFPSNHFMARQIQGKALKRLDKSKLPNWHNLNPVLLKALEVNDPGN 117

Query: 127 KYSAPYTWGSSGVTYNVDKITARMPD-APIGSLAMLFDPKIVSRFADCGVTLMDAPTEVI 185
           +Y  PY WGS+G+ YN+DK+ A + D AP+ S  ++F P+ +S+   CGV ++D   E++
Sbjct: 118 QYGFPYLWGSTGIGYNIDKVKAVLGDNAPVDSWDLIFKPEYMSKLKSCGVAVLDNGPELL 177

Query: 186 PLALQYLGKDPRSASPADLKAAEQLLLGIRPYIRKFDSVNYLTSLPNGDVCLALTWSGDY 245
           P+AL YLG    S  P D + A+ LL+ +RPYI  F S  Y   L NGD+C+ + +SGD 
Sbjct: 178 PIALHYLGLPHHSQDPKDYEKAKDLLMKVRPYISYFHSSKYTGDLANGDICVVVGFSGDV 237

Query: 246 ATAQARAVEAKKDIKLSFFIPREGSLIWFDNLYIPKDAPHAANAHRFIEFLLQPQTMAKV 305
             A+ RA EA   +K+ + IP+EG+ +WFD + +P DAP     + ++ +LLQP+ MA +
Sbjct: 238 LQAKNRADEANNGVKVGYSIPKEGAPMWFDMVAMPVDAPDEKAGYAYMNYLLQPEVMANI 297

Query: 306 TDYIHYANSNAAATALVRDDIRQDPAIYPDAPTRERLFAQKTQSPRDMRAITRVWSTVKT 365
           ++++ YAN N  A  LV   ++ +  IYP      +L+A +    +  R  TR+W+++K 
Sbjct: 298 SNHVQYANGNLKADGLVDPAMKGNTMIYPSDEVMGKLYALEAMPAKIDRIRTRIWTSIKA 357

Query: 366 G 366
           G
Sbjct: 358 G 358