Pairwise Alignments

Query, 367 a.a., Putrescine-binding periplasmic protein from Pseudomonas putida KT2440

Subject, 365 a.a., ABC transporter, substrate binding protein (putrescine) from Agrobacterium fabrum C58

 Score =  319 bits (817), Expect = 8e-92
 Identities = 147/355 (41%), Positives = 222/355 (62%), Gaps = 6/355 (1%)

Query: 12  LLASGASLAQAAEVGSGNTLRLYNWTDYIGETTLADFEKATGIKVIYDTFDGYETVQTKL 71
           L+A+G+++AQ   V       +YNW+DYI    L DF K TGIKV+YD +DG E ++TKL
Sbjct: 16  LVAAGSAMAQEKVV------HVYNWSDYIDPVILEDFTKETGIKVVYDVYDGNEVLETKL 69

Query: 72  LTGRSGYDLVMLNASLVPPLISAGVFQALDKQQLPSWHNLDQQVVNDLQGYDPGLKYSAP 131
           L G SGYD+V   +  +   I AGV+Q LDK +LP+  N    +   L  YDPG +Y+  
Sbjct: 70  LAGSSGYDVVAPTSPFLARQIKAGVYQKLDKSKLPNLKNAWPDITERLAKYDPGNEYAVN 129

Query: 132 YTWGSSGVTYNVDKITARMPDAPIGSLAMLFDPKIVSRFADCGVTLMDAPTEVIPLALQY 191
           Y WG++G+ YNV K+ A + D P+ S  +LF P+   +   CG+ ++DA  E   +A+ Y
Sbjct: 130 YMWGTTGIGYNVAKVKAALGDVPVDSWDVLFKPENAEKLKSCGINILDASDETFAIAMNY 189

Query: 192 LGKDPRSASPADLKAAEQLLLGIRPYIRKFDSVNYLTSLPNGDVCLALTWSGDYATAQAR 251
           LGK+P S   ADL+A  ++   IRPY++ F+S  Y+  L NGD C+++ WSGD   A+ R
Sbjct: 190 LGKNPDSKETADLEAGGEVYSKIRPYVKTFNSSPYINDLANGDTCISIGWSGDILQAKTR 249

Query: 252 AVEAKKDIKLSFFIPREGSLIWFDNLYIPKDAPHAANAHRFIEFLLQPQTMAKVTDYIHY 311
           A EAK  +++++ IP+EG+ IW D+  IP DA +   AH FI ++++P+  AK +DY+ Y
Sbjct: 250 AEEAKNGVEVNYVIPKEGTYIWMDSFAIPADAKNVDEAHAFINYMMKPEVAAKASDYVQY 309

Query: 312 ANSNAAATALVRDDIRQDPAIYPDAPTRERLFAQKTQSPRDMRAITRVWSTVKTG 366
           AN N  + AL+   + ++P +YPD  T ++LF      P++ R + RVW+ +KTG
Sbjct: 310 ANGNLPSQALMDPSVAKNPGVYPDPETMKKLFTISPYGPKEQRVLNRVWTQIKTG 364