Pairwise Alignments

Query, 290 a.a., HTH-type transcriptional regulator from Pseudomonas putida KT2440

Subject, 313 a.a., HTH-type transcriptional regulator BenM from Xanthobacter sp. DMC5

 Score =  239 bits (610), Expect = 6e-68
 Identities = 136/291 (46%), Positives = 182/291 (62%), Gaps = 5/291 (1%)

Query: 1   MELRHLRYFKVLAETLNFTRAAELLHIAQPPLSRQISQLEDQLGTLLVVRE-RPLRLTEA 59
           M+LR LRYF  +A   NFTRAA+ L+IAQPPLSRQI  LED+LG  L++R  RP+RLTEA
Sbjct: 1   MDLRQLRYFVGVARERNFTRAAQQLNIAQPPLSRQIQALEDELGVALLIRNSRPVRLTEA 60

Query: 60  GRFFYEQTCTVLQQLQNISDNTRRIGQGQRQWLGIGFAPSTLYTVLPELIRELRQDS-EL 118
           GR FYEQ   VL ++  +   TRR+G  Q   L IGF  STLY  LP L+R+LR  + ++
Sbjct: 61  GRLFYEQALQVLGRVDQMRAATRRVGLNQNSVLSIGFVASTLYGGLPSLVRKLRHRAPDI 120

Query: 119 ELGLNEMTTLQQVEALKSGRIDIGFGRIRIDDPVIHQQVLCEDPLVAVLPKGHPLA--GS 176
           E+ + EM ++QQ+ ALK GRIDIGFGR+   D  + + VL E+ L   +P+  PLA   +
Sbjct: 121 EIQVLEMMSIQQIPALKEGRIDIGFGRLHHSDSGVVEIVLREERLTVAIPRDTPLAQDSA 180

Query: 177 PLSLAQLAGEAFILYPANPRPSYADHVLALFAHHGMSIRVSQWANELQTAIGLVAVGVGV 236
           PL +  L G+  I+YP  PRP YAD VL L   H +         E+QTA+GLVA   G+
Sbjct: 181 PLPIGALTGQKLIVYPKEPRPGYADQVLNLLHGHDVRPAEVHEVREIQTALGLVAAETGL 240

Query: 237 TLVPASVQQQHRPDIEYVGLLDSGAVSPIILSRRKGDVSPIVQRCLALIEQ 287
            ++P+S +Q  R D+ Y  L    A SP+IL  R GD SP +     +I++
Sbjct: 241 CVIPSSARQM-RSDVHYRLLEGERATSPVILYHRVGDTSPYIDLVKEVIKE 290