Pairwise Alignments

Query, 290 a.a., HTH-type transcriptional regulator from Pseudomonas putida KT2440

Subject, 297 a.a., LysR family transcriptional regulator from Pseudomonas simiae WCS417

 Score =  166 bits (421), Expect = 4e-46
 Identities = 116/295 (39%), Positives = 165/295 (55%), Gaps = 6/295 (2%)

Query: 1   MELRHLRYFKVLAETLNFTRAAELLHIAQPPLSRQISQLEDQLGTLLVVR-ERPLRLTEA 59
           MELRHLRYF  +AE L+F RAA++L I+QPPLS+QI  LE ++G  L  R  R + L+EA
Sbjct: 1   MELRHLRYFIAVAEELHFGRAAQVLGISQPPLSQQIQALEQEVGARLFERTNRRVELSEA 60

Query: 60  GRFFYEQTCTVLQQLQNISDNTRRIGQGQRQWLGIGFAPSTLY-TVLPELIRELRQD-SE 117
           GR F  +   VL Q+   +D  RR   G+   L IGF  S  + + +P+ I   RQ    
Sbjct: 61  GRLFLHEARLVLAQVDKAADVARRAQLGELGELKIGFTSSAPFNSSIPQAIFAFRQAFPA 120

Query: 118 LELGLNEMTTLQQVEALKSGRIDIGFGRIRIDDPVIHQQVLCEDPLVAVLPKGHPL-AGS 176
           + L L EM++ +  E+L    I +G  R       +    L  +PLVAV+  GHPL AGS
Sbjct: 121 VHLNLQEMSSTEVAESLVDESIQVGLMRPLPLPDSLSVVELMREPLVAVMNAGHPLVAGS 180

Query: 177 P--LSLAQLAGEAFILYPANPRPSYADHVLALFAHHGMSIRVSQWANELQTAIGLVAVGV 234
              L LAQLA E F+ +P +        +L+L    G S   +Q A E  T IGLVA G+
Sbjct: 181 ERGLHLAQLAEEPFVFFPRSYGSGLYAQLLSLCRDAGFSPHFAQEAGEAMTIIGLVAAGL 240

Query: 235 GVTLVPASVQQQHRPDIEYVGLLDSGAVSPIILSRRKGDVSPIVQRCLALIEQQA 289
           GV+++PAS Q+     + Y  LLD  AV+ + L +RKG  +P+    + L+ +++
Sbjct: 241 GVSVLPASYQRIRIDGVVYRTLLDPEAVTSVWLVQRKGAQTPMAAAFVELLTRKS 295