Pairwise Alignments

Query, 290 a.a., HTH-type transcriptional regulator from Pseudomonas putida KT2440

Subject, 297 a.a., LysR family transcriptional regulator from Pseudomonas simiae WCS417

 Score =  140 bits (353), Expect = 3e-38
 Identities = 98/291 (33%), Positives = 148/291 (50%), Gaps = 4/291 (1%)

Query: 1   MELRHLRYFKVLAETLNFTRAAELLHIAQPPLSRQISQLEDQLGTLLVVR-ERPLRLTEA 59
           ++LR LRYF  +AE L+F RAA  LH+AQPPL+RQIS LE +LG  L  R  R + LT  
Sbjct: 2   LDLRKLRYFLTVAEELHFGRAAIRLHLAQPPLTRQISALETELGFKLFDRTSRTVSLTAQ 61

Query: 60  GRFFYEQTCTVLQQLQNISDNTRRIGQGQRQWLGIGFAPS-TLYTVLPELIRELRQD-SE 117
           GR F      VL+Q++       ++  G    L +G+  S  L  +  + I+   Q   +
Sbjct: 62  GRSFLPYARGVLEQVELAQVIAGKLAAGTAGQLALGYVSSIALSDLFSQAIQAFAQRFPD 121

Query: 118 LELGLNEMTTLQQVEALKSGRIDIGFGRIRIDDPVIHQQVLCEDPLVAVLPKGHPLAGSP 177
           ++L L E  +      +  GR+D+G  R+   D  +    L E+ LVA +    PLA  P
Sbjct: 122 VQLTLVECASGSLGAQVADGRLDLGLSRLLPQDEAVQALSLGEERLVAAVSSESPLARQP 181

Query: 178 -LSLAQLAGEAFILYPANPRPSYADHVLALFAHHGMSIRVSQWANELQTAIGLVAVGVGV 236
            ++LAQL+    IL+PA+        +  L+ HHG  +R+     ++ + I LVA G GV
Sbjct: 182 SVNLAQLSAYPLILFPADYGSGLNQSIEQLYRHHGQPLRLGPTGRQITSIIALVAAGQGV 241

Query: 237 TLVPASVQQQHRPDIEYVGLLDSGAVSPIILSRRKGDVSPIVQRCLALIEQ 287
            LVP   Q      + Y  L++  A + +++  R    S +V   LA+I Q
Sbjct: 242 ALVPECTQSLMNKGVTYRPLVEVDACAQLLVLTRTATKSVLVDAFLAVIAQ 292