Pairwise Alignments

Query, 290 a.a., HTH-type transcriptional regulator from Pseudomonas putida KT2440

Subject, 288 a.a., hypothetical protein from Variovorax sp. SCN45

 Score =  128 bits (322), Expect = 1e-34
 Identities = 91/271 (33%), Positives = 134/271 (49%), Gaps = 12/271 (4%)

Query: 6   LRYFKVLAETLNFTRAAELLHIAQPPLSRQISQLEDQLGTLLVVR-ERPLRLTEAGRFFY 64
           +R    +AE  + T+AAE L +AQP L++ +++LE +LGT L  R  R   LT+AG    
Sbjct: 1   MRCVVAIAEAGSLTKAAERLGLAQPALTQTLNRLEQELGTRLFTRSRRGAALTDAGLAVI 60

Query: 65  EQTCTVLQQLQNISDNTRRIGQGQRQWLGIGFAPSTLYTVLPELIRELRQ-DSELELGLN 123
           +     L      ++  R +G G+   L IGF    +Y VLP  +R LR    +LE+ L 
Sbjct: 61  DDLRASLAYGDTAAERARAMGAGRAGRLTIGFVTHAVYEVLPNALRRLRAGHPQLEVVLR 120

Query: 124 EMTTLQQVEALKSGRIDIGFGRIRIDDPV-----IHQQVLCEDPLVAVLPKGHPL-AGSP 177
           EM+  +QV AL+ GRIDI      +  PV     +H+  L E+PL+A LP   PL     
Sbjct: 121 EMSNAEQVAALEGGRIDIAL----LHPPVTVTARVHELRLGEEPLIAALPAAWPLHEDGC 176

Query: 178 LSLAQLAGEAFILYPANPRPSYADHVLALFAHHGMSIRVSQWANELQTAIGLVAVGVGVT 237
           +SLA +A    + +P    P+    +L      G   RV Q AN   T +  VA G+G +
Sbjct: 177 VSLADVARHGLVWFPEQQIPALRAQLLGALRRAGHETRVVQDANRTLTVLACVAAGLGWS 236

Query: 238 LVPASVQQQHRPDIEYVGLLDSGAVSPIILS 268
           L+P SV+      + Y  + D   +    LS
Sbjct: 237 LLPRSVRALQHEGVRYAEVRDGAGLPAFELS 267