Pairwise Alignments

Query, 290 a.a., HTH-type transcriptional regulator from Pseudomonas putida KT2440

Subject, 321 a.a., Transcriptional regulator, LysR family from Variovorax sp. SCN45

 Score =  147 bits (370), Expect = 4e-40
 Identities = 108/295 (36%), Positives = 161/295 (54%), Gaps = 15/295 (5%)

Query: 1   MELRHLRYFKVLAETLNFTRAAELLHIAQPPLSRQISQLEDQLGTLLVVR-ERPLRLTEA 59
           M+LR LR F  LAET +F+ AAE LH+AQPPLS  I +LE++LGT+L VR  R +RLT A
Sbjct: 1   MDLRQLRQFLALAETGSFSVAAERLHMAQPPLSVAIRKLEEELGTMLFVRSSRGVRLTAA 60

Query: 60  GRFFYEQTCTVLQQLQNISDNTRRIGQGQRQWLGIGFAPSTLYTVLPELIRELR-QDSEL 118
           G    +     L    +I    +    G+   L IGF+ S    +LP L++  R +   +
Sbjct: 61  GDAALKAARECLDAATHIKAAVQLAVAGESGKLAIGFSGSVTLRLLPRLVQAFRLRHPAV 120

Query: 119 ELGLNEMTTLQQVEALKSGRIDIGFGRIRID-DPVIHQQVLCEDPLVAVLPKGHPLAGSP 177
            L L E T L+ +  +++G +D+GF R   +  P +  Q++ ED     LP+GH LA  P
Sbjct: 121 HLDLKEGTNLELLSRVEAGTLDLGFVRFPTNRPPELRFQMVEEDRFCLALPRGHALARKP 180

Query: 178 -LSLAQLAGEAFILYPANPRPSYADHVLALFAHHGMSIRVSQWANELQTAIGLVAVGVGV 236
            ++LA L G+ FI Y  +P       V  +F   G++ R++Q A ++QTA+GLVA G+G+
Sbjct: 181 AVALAALEGQPFIGYAPSPVGGLHAAVSLVFQRAGVAPRITQEAIQVQTALGLVASGLGM 240

Query: 237 TLVPA-------SVQQQHRPDIEYVGLLDSGAVSPIILSRRKGDVSPIVQRCLAL 284
            LVPA       S+    RP ++    L   A   I L+ R    +P ++R L +
Sbjct: 241 ALVPAANTPYQRSLGAVFRPILD----LPEDARIGIALAYRANTENPALKRFLEI 291