Pairwise Alignments

Query, 290 a.a., HTH-type transcriptional regulator from Pseudomonas putida KT2440

Subject, 299 a.a., putative DNA-binding transcriptional regulator from Pseudomonas putida KT2440

 Score =  157 bits (397), Expect = 3e-43
 Identities = 109/296 (36%), Positives = 159/296 (53%), Gaps = 6/296 (2%)

Query: 1   MELRHLRYFKVLAETLNFTRAAELLHIAQPPLSRQISQLEDQLGTLLVVR-ERPLRLTEA 59
           MELRHLRYF  +AE L+F RAA+ L I+QPPLS+QI  LE +LG  L  R  R + L+EA
Sbjct: 1   MELRHLRYFIAVAEELHFGRAAQQLGISQPPLSQQIQALEQELGARLFDRTNRRVELSEA 60

Query: 60  GRFFYEQTCTVLQQLQNISDNTRRIGQGQRQWLGIGFAPSTLYT-VLPELIRELRQD-SE 117
           GR F E+   VL Q++  +D  RR   G+   + IGF  S  +T  +P+ I   RQ    
Sbjct: 61  GRLFLEEARQVLAQVEKAADVARRAQLGELGEMKIGFTSSAPFTSKIPKAIHAFRQRFPA 120

Query: 118 LELGLNEMTTLQQVEALKSGRIDIGFGRIRIDDPVIHQQVLCEDPLVAVLPKGHPLAGSP 177
           + L L EM++    E +    I++G  R       +    L  +PLVAV+   HPLA   
Sbjct: 121 VHLNLKEMSSRDVAEGVFDESIEVGLMRPMPLPEGLVATELFREPLVAVINASHPLAEGT 180

Query: 178 ---LSLAQLAGEAFILYPANPRPSYADHVLALFAHHGMSIRVSQWANELQTAIGLVAVGV 234
              + +A LA E F+ +P +        +L+L  H G S   +Q A E  T IGLV+ G+
Sbjct: 181 EQGVYMAALAPEPFVFFPRSYGSGLHAQLLSLARHAGFSPHFAQEAGEAMTIIGLVSAGL 240

Query: 235 GVTLVPASVQQQHRPDIEYVGLLDSGAVSPIILSRRKGDVSPIVQRCLALIEQQAI 290
           GV+++PAS Q+     + Y  LLD  A++ + L +R+   S + +    L+  Q +
Sbjct: 241 GVSVLPASFQRMRIEGVVYRTLLDEEAMTAVWLVQRERGHSVMAKAFAELLTGQVV 296