Pairwise Alignments

Query, 290 a.a., HTH-type transcriptional regulator from Pseudomonas putida KT2440

Subject, 299 a.a., Transcriptional regulator, LysR family from Pseudomonas putida KT2440

 Score =  129 bits (325), Expect = 6e-35
 Identities = 98/298 (32%), Positives = 154/298 (51%), Gaps = 11/298 (3%)

Query: 1   MELRHLRYFKVLAETLNFTRAAELLHIAQPPLSRQISQLEDQLGTLLVVR-ERPLRLTEA 59
           +E R LR F  +AE L+F +AA+ LH+AQPPLS+ I++LE++LG  L++R +R +RLT A
Sbjct: 2   IETRLLRQFIAVAEELHFHKAAQRLHMAQPPLSQAINRLEEKLGFGLLLRNKRGVRLTAA 61

Query: 60  GRFFYEQTCTVLQQLQNISDNTRRIGQGQRQWLGIGFAPSTLYTVLPELIRELRQD-SEL 118
           G  F +     L +L+   +  R +  G    L I       Y  L   +R  R+    +
Sbjct: 62  GAAFLDTAYRTLAELEQGIEYARNVSAGVSGKLTITAISIAYYDSLLNRLRRFRETYPNV 121

Query: 119 ELGLNEMTTLQQVEALKSGRIDIGFGRIRIDDPV--IHQQVLCEDPLVAVLPKGHPLAG- 175
           +L + EM +  Q +AL +G  DIGF R R+  PV  +  ++L ++ +V  LP  HP+A  
Sbjct: 122 QLTIREMPSASQAKALLAGEADIGFMR-RLPLPVGTLEARLLLDEQIVMALPASHPMARF 180

Query: 176 SPLSLAQLAGEAFILYPANPRPSYADHVLALFAHHGMSIRVSQWANELQTAIGLVAVGVG 235
             + L + A E F+  P      Y   ++AL    G   +V Q A ++ T +GLVA G G
Sbjct: 181 EAVDLREFADEDFVFTPQALGGGYHAQLVALCESAGFYPKVVQEAAQIHTLLGLVACGFG 240

Query: 236 VTLVPAS-VQQQHRPDIEYVGLLDSGAVSP----IILSRRKGDVSPIVQRCLALIEQQ 288
           V LVPAS V+   R  +++  +       P    + +     + SP +   +A+ E Q
Sbjct: 241 VALVPASFVRSTPRERVQFCPIRPIDDQPPPGLGLYMKWNAQNASPALANFIAMFETQ 298