Pairwise Alignments

Query, 503 a.a., diguanylate cyclase from Pseudomonas putida KT2440

Subject, 1276 a.a., Sensory box protein from Pseudomonas putida KT2440

 Score =  233 bits (595), Expect = 2e-65
 Identities = 164/515 (31%), Positives = 253/515 (49%), Gaps = 48/515 (9%)

Query: 11   YRLLIQSVVDYAIYLLTPEGIVANW-NPGAQRAKGYRAEEIVGQHYSLFYTDAERAAGLP 69
            YR+L +S+ D  +   T   +  N+ +P  Q   GY+A+ I    +     +  +  G+ 
Sbjct: 582  YRMLAESISD--VIFSTDNQLKLNYVSPSVQSVLGYQADWIFANGWQSIVANPAQLTGIY 639

Query: 70   AFNLEQARSTGRFEETGAR-------------LRKDGTAFHAHVVIEAVYDDAGQLVGFA 116
            +     +++ G   +                 LR DG      + +  V+DD  +  G  
Sbjct: 640  SLMERVSKAMGDPAQMAQLCSQLPTQLFLFDCLRADGRKIPIELRLVLVWDDDQRFEGVL 699

Query: 117  KVTRDISERHRQELELLQAKELAEQYSQEMAKLSQFLDSVIANIPASVIVQDLESQRILL 176
             V RDIS++ R E +L  A  + E  +           +++   PA  IVQ         
Sbjct: 700  GVGRDISQQRRAEKDLRMAATVFEHSTS----------AILITDPAGYIVQ--------- 740

Query: 177  ANQQAERLFGGPQHSMIGQLPRECLAPAAGD-----YLEQQFVRGARSTKGHAAETRVDT 231
            AN+   R+ G     ++ QLP         +      ++Q   RG  S +G     R D 
Sbjct: 741  ANEAFSRVSGYAVSEVLDQLPGMLTVDEQQEGHLRYVVKQLHQRG--SWEGEVWLKRRDG 798

Query: 232  ARGPRTLRSRTLLSQNREGQADYVLFVAEDATEELAAHAQIHHMAHHDALTGLPNRTLFH 291
               P  +    +L    +  A YV F   D +E  A+  +IH +A++DALT LPNRTLF 
Sbjct: 799  DHYPAWVGITAVLDDEGD-LASYVCFFT-DISERKASEQRIHRLAYYDALTHLPNRTLFQ 856

Query: 292  ERLRQALLRGSENAKLTAALCLDLDNFKNINDSLGHAFGDKLLRELGKRLRRELREHDTL 351
            +RL  AL +          + LDLD FK INDSLGHA GD++L+++  RL   + + DT+
Sbjct: 857  DRLYNALQQAERQKAWVVLMFLDLDRFKPINDSLGHAAGDRMLKDMALRLLACVDDDDTV 916

Query: 352  ARLGGDEFAVVLTGLEGRDAACN----TAQRLIKAISPPFRIEGHQFAVGVSIGIAIAPD 407
            AR+GGDEF ++L     R+ A N     A+ ++ ++  PF +E  +F V  SIGIA++P 
Sbjct: 917  ARMGGDEFTLLLQPRPTREMALNRAIHVAENILGSLVRPFVLENREFFVTASIGIALSPQ 976

Query: 408  DHDQAEQLLGYADMALYQAKRNGRNRYECFDVELDVAARQRRLVETDLRTALHLGQLQLH 467
            D  +  QL+  AD A+Y AK  G+N ++ +  E++ +A +R  +E+DLR A+   +  L+
Sbjct: 977  DGSELSQLMKNADTAMYHAKERGKNNFQFYQAEMNASALERLELESDLRHAMEQNEFILY 1036

Query: 468  YQPVVDHQTSSVTGYEALLRWEHPTRGMVMPMDFI 502
            YQP        +TG EALLRW HPTRG+V P DFI
Sbjct: 1037 YQPQFSGDGKRLTGAEALLRWRHPTRGLVPPGDFI 1071



 Score = 31.2 bits (69), Expect = 2e-04
 Identities = 18/66 (27%), Positives = 31/66 (46%), Gaps = 14/66 (21%)

Query: 121 DISERHRQELELLQAKELAEQYSQEMAKLSQFLDSVIANIPASVIVQDLESQRILLANQQ 180
           DI+ R + EL LL+ +               F   V+  +P  + VQD+ SQR++ +N+ 
Sbjct: 431 DITSRKQVELSLLERES--------------FWSDVVRTVPDQLYVQDVPSQRMIFSNRH 476

Query: 181 AERLFG 186
             +  G
Sbjct: 477 LGQTLG 482