Pairwise Alignments

Query, 503 a.a., diguanylate cyclase from Pseudomonas putida KT2440

Subject, 1247 a.a., Sensory box protein from Pseudomonas putida KT2440

 Score =  220 bits (560), Expect = 3e-61
 Identities = 138/387 (35%), Positives = 198/387 (51%), Gaps = 22/387 (5%)

Query: 118  VTRDISERHRQELELLQAKELAEQYSQEMAKLSQFLDSVIANIPASVIVQDLESQRILLA 177
            + RDI+ERH  + +L                  Q   +V  N    V++ D++ QRI   
Sbjct: 667  IARDITERHLMQEKL------------------QLAATVFENTAEGVLITDID-QRISAV 707

Query: 178  NQQAERLFGGPQHSMIGQLPRECLAPAAGDYLEQQFVRGARSTKGHAAETRVDTARGPRT 237
            N+    + G  +   +GQ PR  LA    D      +    + +GH      +  +    
Sbjct: 708  NRAFSEITGYSEIEALGQTPR-LLASGQHDSAFYLAMWHQLTAEGHWQGEIYNKRKNGEL 766

Query: 238  LRSRTLLSQNREGQADYVLFVAEDATEELAAHAQ--IHHMAHHDALTGLPNRTLFHERLR 295
              S   +S  R    +   FVA  A      HAQ  + + AHHD LTGLPNRTLF  RL+
Sbjct: 767  YPSWLTISAVRNSDREITHFVAVFADISSIKHAQAKLDYQAHHDPLTGLPNRTLFENRLQ 826

Query: 296  QALLRGSENAKLTAALCLDLDNFKNINDSLGHAFGDKLLRELGKRLRRELREHDTLARLG 355
              L     + +  A L LDLD FK+INDSLGH  GD LL+ + +RL+ ++R+ DT+ARLG
Sbjct: 827  GVLTCAQVSNRQGAVLFLDLDRFKHINDSLGHPVGDLLLKGIAQRLKEQVRDVDTVARLG 886

Query: 356  GDEFAVVLTGLEGRDAACNTAQRLIKAISPPFRIEGHQFAVGVSIGIAIAPDDHDQAEQL 415
            GDEF ++L GL     A   A +L+   + PF+   H+F    SIGI++ P D      L
Sbjct: 887  GDEFIILLPGLHKPSDASTIANKLLACFNAPFQAGEHEFFTSASIGISLYPQDGTDVSTL 946

Query: 416  LGYADMALYQAKRNGRNRYECFDVELDVAARQRRLVETDLRTALHLGQLQLHYQPVVDHQ 475
            +  AD A+Y++K  GRNR E +  +L   A +R  +E +LR A+   ++ L +QP +  +
Sbjct: 947  IRNADAAMYRSKAKGRNRVEAYTRDLTAQASERIALEHELRRAVERNEMSLCFQPKLSLK 1006

Query: 476  TSSVTGYEALLRWEHPTRGMVMPMDFI 502
            T S+ G EAL+RW HPT G V P  FI
Sbjct: 1007 TQSLVGAEALIRWSHPTFGEVPPEHFI 1033



 Score = 27.7 bits (60), Expect = 0.003
 Identities = 42/184 (22%), Positives = 71/184 (38%), Gaps = 27/184 (14%)

Query: 8   DIMYRLLIQSVVDYA--IYLLTPEGI--------VANWNPGAQRAKGYRAEEIVGQHYSL 57
           DI  R L+Q  +  A  ++  T EG+        ++  N       GY   E +GQ   L
Sbjct: 670 DITERHLMQEKLQLAATVFENTAEGVLITDIDQRISAVNRAFSEITGYSEIEALGQTPRL 729

Query: 58  FYTDAERAAGLPAFNLEQARSTGRFEETGARLRKDGTAFHAHVVIEAVYDDAGQLVGFAK 117
             +    +A   A    Q  + G ++      RK+G  + + + I AV +   ++  F  
Sbjct: 730 LASGQHDSAFYLAM-WHQLTAEGHWQGEIYNKRKNGELYPSWLTISAVRNSDREITHFVA 788

Query: 118 VTRDIS-----------ERHRQELELLQAKELAEQYSQEMAKLSQFLDSVIANIPASVIV 166
           V  DIS           + H   L  L  + L E   Q +   +Q     ++N   +V+ 
Sbjct: 789 VFADISSIKHAQAKLDYQAHHDPLTGLPNRTLFENRLQGVLTCAQ-----VSNRQGAVLF 843

Query: 167 QDLE 170
            DL+
Sbjct: 844 LDLD 847