Pairwise Alignments

Query, 335 a.a., AraC family transcriptional regulator from Pseudomonas putida KT2440

Subject, 315 a.a., Transcriptional regulator, AraC family from Variovorax sp. SCN45

 Score =  118 bits (295), Expect = 2e-31
 Identities = 94/314 (29%), Positives = 146/314 (46%), Gaps = 8/314 (2%)

Query: 20  KTFGFLILPNFTTIGLASAVETLRMANLAARKPLYRSVLIAADDAPVVASNGMRVLPDYN 79
           K  G L+ P F  + LA A+    +AN+   +P+Y   +++    PVV+S+G+ V  D  
Sbjct: 2   KRIGVLVFPGFQILDLA-AIAAFELANMHLDQPVYCVEMLSETGGPVVSSSGVTV--DSK 58

Query: 80  ITNAPALDALLVVGANPIDRSRSNRPLIDWLRQLARQRLPLGGICTGSYLLAKAELLKGY 139
              A   D L++ G+  I  + ++  L   LR   R    +  ICTG++ LA A LL G 
Sbjct: 59  RYTAAKFDTLVMTGSLTI--TPTSEKLCQILRSGRRSARRVASICTGAFGLADAGLLDGR 116

Query: 140 RCTIHWEDLPTLQAHFP-GIVISSQLFELDRDRYTCSGGVAAMDMMLQLVARDTGGQDIA 198
           R T HW     LQ   P   V   ++F  D   +T +G  A +D++L LV  D G     
Sbjct: 117 RVTTHWAFAQELQRCHPLAKVQPDRIFINDDSLWTSAGMTAGIDLVLALVEEDLGVDMAR 176

Query: 199 AKAAELLLCDRVRGERERQRVPLRTLLGSAQPKLSQVVAIMEANLEEPLGLEELASLNDV 258
             A +L++  R  G + +    L   L     ++   +A   A+L E L +EELA +  +
Sbjct: 177 LIAKKLVVYHRRAGGQSQFSALLE--LEPKSDRIQLALAYARAHLREGLSVEELAEVAHL 234

Query: 259 TVRQLERLFHKYLQRTPSQYYLELRLSRARELLLRSDVQVREVALACGFSSPAHFSKSYS 318
           + RQ  R F     ++P+Q    LR+  AR L+    + +  VA   GF  P    +++ 
Sbjct: 235 SPRQFSRAFKAETGQSPAQAVESLRVEAARALIDEGRLALGVVAQEVGFGDPERMRRAFL 294

Query: 319 RFFGLSPLGERRQA 332
           R  G  P   RR A
Sbjct: 295 RTLGQPPQSVRRVA 308