Pairwise Alignments

Query, 335 a.a., AraC family transcriptional regulator from Pseudomonas putida KT2440

Subject, 326 a.a., Transcriptional regulator, AraC family from Pseudomonas putida KT2440

 Score =  216 bits (551), Expect = 5e-61
 Identities = 126/315 (40%), Positives = 181/315 (57%), Gaps = 8/315 (2%)

Query: 18  SAKTFGFLILPNFTTIGLASAVETLRMANLAARKPLYRSVLIAADDAPVVASNGMRVLPD 77
           + +  GFLI P+   + LA A E L +A       +Y  V + A+ A      G   LP 
Sbjct: 2   TTQRIGFLIWPSTRPLTLALAEEVLLVAQRVHPDVVYELVFLQAEPA----QEGAWRLPG 57

Query: 78  YNITNA-PALDALLVVGANPIDRSRSNRPLIDWLRQLARQRLPLGGICTGSYLLAKAELL 136
              T        L ++   P   +         L+QLAR    +GG+  G Y LA   LL
Sbjct: 58  EPWTGRLEGCHKLFLLADEP--PAAMGAAFSAALKQLARSGCLIGGLSAGVYPLAMLGLL 115

Query: 137 KGYRCTIHWEDLPTLQAHFPGIVISSQLFELDRDRYTCSGGVAAMDMMLQLVARDTGGQD 196
            GYR  +HW         FP ++ +S LF+ DRDR T  GG+A  D++L ++ARD G + 
Sbjct: 116 DGYRAAVHWRWQDDFAERFPKVIATSHLFDWDRDRLTACGGMAVTDLLLAVLARDHGAE- 174

Query: 197 IAAKAAELLLCDRVRGERERQRVPLRTLLGSAQPKLSQVVAIMEANLEEPLGLEELASLN 256
           +A   +E L+ +R+R   ERQR+PL+  LGS+ PKL+Q V +MEAN+EEPL  +E+A   
Sbjct: 175 LAGAVSEELVVERIREGGERQRIPLQNRLGSSHPKLTQAVLLMEANIEEPLTTDEIAQHV 234

Query: 257 DVTVRQLERLFHKYLQRTPSQYYLELRLSRARELLLRSDVQVREVALACGFSSPAHFSKS 316
            V+ RQLER+F +YL R PSQYYLELRL++AR++L+++   + ++ L+CGFSS  HFS +
Sbjct: 235 CVSRRQLERIFKQYLNRVPSQYYLELRLNKARQMLMQTSKSIIQIGLSCGFSSGPHFSSA 294

Query: 317 YSRFFGLSPLGERRQ 331
           Y  FFG +P  +R Q
Sbjct: 295 YRNFFGATPREDRNQ 309