Pairwise Alignments

Query, 335 a.a., AraC family transcriptional regulator from Pseudomonas putida KT2440

Subject, 343 a.a., AraC family transcriptional regulator from Agrobacterium fabrum C58

 Score =  148 bits (374), Expect = 2e-40
 Identities = 108/330 (32%), Positives = 166/330 (50%), Gaps = 9/330 (2%)

Query: 10  SPSSVKNCSAKTFGFLILPNFTTIGLASAVETLRMANLAA---RKPLYRSVLIAADDAPV 66
           SP + K  S     FL+   FT    A+ V+ LR+A   A   R  L    +++A  A V
Sbjct: 3   SPRAKKRLSV---AFLLADRFTLSAFANFVDVLRLAADEADRSRPILCEWSVLSATLANV 59

Query: 67  VASNGMRVLPDYNITNAPALDALLVVGANPIDRSRSNRPLIDWLRQLARQRLPLGGICTG 126
            +S G++V PD  + +A   D ++VVG    D S      + +L+  A   +P+ G+CTG
Sbjct: 60  QSSCGVKVQPDTRLIDAGHYDYIVVVGGLISDHSALPPEALRFLKDRAAAGIPIVGLCTG 119

Query: 127 SYLLAKAELLKGYRCTIHWEDLPTLQAHFPGI-VISSQLFELDRDRYTCSGGVAAMDMML 185
            ++L +A LL GYRC + W         F  + ++S Q+F +DRDR TCSGG  A  +  
Sbjct: 120 VFILHEAGLLDGYRCCVSWFHRQDFLDRFDTVQMVSDQIFVIDRDRLTCSGGHGAAHLAA 179

Query: 186 QLVARDTGGQDIAAKAAELLLCDRVRGERERQRVPLRTLLGSAQPKLSQVVAIMEANLEE 245
            LV R  G Q  A K+  +++ D      E+ +   ++   +  P + + +  M+ N+E 
Sbjct: 180 FLVERHVG-QSAAIKSLNIMMIDSALSG-EKPQPGQQSARKANDPLVKKAILRMQQNIEV 237

Query: 246 PLGLEELASLNDVTVRQLERLFHKYLQRTPSQYYLELRLSRARELLLRSDVQVREVALAC 305
           P  + ELA    +  R LER F   L+ TPS+ YLELRL RA  LL  +   + ++ALA 
Sbjct: 238 PRTVLELAHDLGLGRRSLERRFLNDLKATPSKVYLELRLDRALSLLRTTHDPITQIALAT 297

Query: 306 GFSSPAHFSKSYSRFFGLSPLGERRQASLH 335
           GF    H S++     G +P   R+  + H
Sbjct: 298 GFCDAPHLSRTLRTERGFTPSEYRKTQAGH 327