Pairwise Alignments

Query, 335 a.a., AraC family transcriptional regulator from Pseudomonas putida KT2440

Subject, 346 a.a., transcriptional regulator, AraC family from Agrobacterium fabrum C58

 Score =  234 bits (597), Expect = 2e-66
 Identities = 128/320 (40%), Positives = 197/320 (61%), Gaps = 13/320 (4%)

Query: 24  FLILPNFTTIGLASAVETLRMANLAARKPLYRSVLIAADDAPVVASNGMRVLPDYNIT-- 81
           F ++P FT +  A+AVETLR+AN       Y   L + D   V++S+G+ +  D  +   
Sbjct: 13  FFLIPQFTMLPFAAAVETLRIANRMLGYAAYEWRLSSLDGQKVMSSSGICLEVDTCLADE 72

Query: 82  -------NAPALDALLVVGANPIDRSRSNRPLIDWLRQLARQRLPLGGICTGSYLLAKAE 134
                  N P + A++  G + +D+   N+ +  WLR+   + + +G +CT +++LA+A 
Sbjct: 73  RRYVSGENRPEM-AIICSGID-VDQ-HVNKSVNAWLREAYNRGIAIGSLCTAAHILAQAG 129

Query: 135 LLKGYRCTIHWEDLPTLQAHFPGIVISSQLFELDRDRYTCSGGVAAMDMMLQLVARDTGG 194
           LL G RC IHWE+LP     FP + + + LFE+D + YTC+GG A++DMML L+ +D G 
Sbjct: 130 LLNGKRCAIHWENLPGFSEAFPQVEVYADLFEVDSNIYTCAGGTASLDMMLSLIGQDFG- 188

Query: 195 QDIAAKAAELLLCDRVRGERERQRVPLRTLLGSAQPKLSQVVAIMEANLEEPLGLEELAS 254
           +++  +  E  L DRVR   +RQR+PLR  LG    K+  ++ +ME NL EPL L ++A 
Sbjct: 189 ENLVNRVCEQQLTDRVRSPNDRQRLPLRARLGVQNSKVLSIIELMEGNLSEPLSLLDIAD 248

Query: 255 LNDVTVRQLERLFHKYLQRTPSQYYLELRLSRARELLLRSDVQVREVALACGFSSPAHFS 314
             D++ RQ+ERLF + + R+P++YYLE+RL RAR LL++S + V EVA+ACGF S +HFS
Sbjct: 249 AADLSRRQVERLFRQEMGRSPARYYLEIRLDRARHLLVQSAMPVVEVAVACGFVSASHFS 308

Query: 315 KSYSRFFGLSPLGERRQASL 334
           K Y   +  +P  ER +  L
Sbjct: 309 KCYREIYNRTPQQERAERKL 328