Pairwise Alignments

Query, 306 a.a., Transcriptional regulator, LysR family from Pseudomonas putida KT2440

Subject, 301 a.a., LysR family transcriptional regulator from Pseudomonas simiae WCS417

 Score =  159 bits (403), Expect = 6e-44
 Identities = 96/274 (35%), Positives = 151/274 (55%), Gaps = 12/274 (4%)

Query: 1   MDTFDSRRADELATLLALYEQGSFAAAGRQLERHPTVLSKRLSALETRLGIRLVERSTRQ 60
           MD F +     ++  + + E GS  AA +      T++   L ALE RLG+ L++R+TR+
Sbjct: 1   MDLFQA-----MSVYVKVVETGSMTAAAQACGMSTTMVGNHLRALEQRLGVSLLKRTTRK 55

Query: 61  LRFTDEGERLVAKVLEASRLIAEAEEEAAEGAATV-RGRLRLALPAAMGRRWLSGMLADF 119
              T+ G +   + LE   L+A++E+ A +  + V +G LR+  P   G   L+  L++F
Sbjct: 56  QSLTEFGGQYYQRCLEVLGLVADSEQLAEQAHSDVPKGTLRITAPPVFGTERLTPALSEF 115

Query: 120 VLAYPQVIVETEYADRFVDLIGEGFDAAIRIGELADNRLVASKLCDHVRILCASPQYLAR 179
              YP + +    ++  +DL+  GFDAAIR+GEL  + L+A  +  +   LCASP YLAR
Sbjct: 116 SRRYPLINLYVVLSNERMDLVDSGFDAAIRLGELETSSLIARPMQAYTLTLCASPDYLAR 175

Query: 180 HGEPAQPEDLAAHNCLGF------NGLRSFPEWRLMSDTRQTSVKVAGSLRSNDNEALLE 233
            G P  P+DL  H+CL F      N   +   WR+  ++ +  V V+GSL  N ++ L +
Sbjct: 176 RGTPQTPDDLQHHDCLAFAYPASDNWRDADKLWRMTGESGEVEVPVSGSLTINSSQGLRQ 235

Query: 234 AARRGVGIVAGGDWLMGEDLASGCLVRVLAQWQL 267
           AA  G+GI+   D L+  DL SG LV +L  ++L
Sbjct: 236 AAVNGMGIIMLADALVQPDLESGKLVALLTTYRL 269