Pairwise Alignments

Query, 260 a.a., L-lysine and D-lysine ABC transporter, ATPase component (from data) from Pseudomonas putida KT2440

Subject, 251 a.a., ABC transporter, ATP-binding protein (cluster 3, basic aa/glutamine/opines) from Variovorax sp. SCN45

 Score =  327 bits (839), Expect = 1e-94
 Identities = 160/240 (66%), Positives = 192/240 (80%)

Query: 20  LIRIEGLNKHYGAFHVLRDIDLQVREGERIVLCGPSGSGKSTLIRCINRLEVAQQGSIQV 79
           +IR+E +NK YG F VL  IDL VR+GERIV+CGPSGSGKSTLIRCINRLE  Q+G I V
Sbjct: 6   IIRMEAVNKWYGEFQVLTGIDLSVRQGERIVICGPSGSGKSTLIRCINRLETVQKGRIVV 65

Query: 80  DGIDLAATTREAAQVRSDIGMVFQHFNLFPHMSVLDNCLLAPTSVRGLSRKDAEERARMY 139
           DGIDL A  +    VR+++GMVFQ FNLFPH+++L+NC LAP   RG+++  AEE A  Y
Sbjct: 66  DGIDLTAGGKNIDAVRAEVGMVFQQFNLFPHLTILENCTLAPKRSRGMTKAQAEEIAMKY 125

Query: 140 LSKVGIESQAHKYPSQLSGGQQQRVAIARALCMKPRIMLFDEPTSALDPEMVAEVLDVLV 199
           L++V I  QA+KYPSQLSGGQQQRVAIARALCM P+IMLFDEPTSALDPEMV EVLD ++
Sbjct: 126 LTRVRIPEQANKYPSQLSGGQQQRVAIARALCMTPKIMLFDEPTSALDPEMVKEVLDTMI 185

Query: 200 QLAGTGMTMLCVTHEMGFARQVAERVLFLEGGQIIEDSPPQVFFNQPRTERAKAFLAQIL 259
            LA  GMTMLCVTHEMGFAR VA+RV+F+  G+I+E +PP+ FF  P+ ER + FL QIL
Sbjct: 186 GLAEDGMTMLCVTHEMGFARSVADRVIFMAEGKIVEQAPPEEFFGNPKDERTRQFLGQIL 245