Pairwise Alignments

Query, 260 a.a., L-lysine and D-lysine ABC transporter, ATPase component (from data) from Pseudomonas putida KT2440

Subject, 260 a.a., ABC transporter, ATP-binding protein (cluster 3, basic aa/glutamine/opines) from Variovorax sp. SCN45

 Score =  319 bits (818), Expect = 3e-92
 Identities = 158/242 (65%), Positives = 190/242 (78%)

Query: 19  VLIRIEGLNKHYGAFHVLRDIDLQVREGERIVLCGPSGSGKSTLIRCINRLEVAQQGSIQ 78
           ++IR+ G+ K YG F VLRDIDL+V+ GERIV+CGPSGSGKSTL+RCINRLE  QQG I 
Sbjct: 19  LVIRMVGVQKWYGDFQVLRDIDLEVQRGERIVICGPSGSGKSTLLRCINRLEEHQQGQIV 78

Query: 79  VDGIDLAATTREAAQVRSDIGMVFQHFNLFPHMSVLDNCLLAPTSVRGLSRKDAEERARM 138
           V+  +L A  R    VR D+GMVFQHFNLFPH+++L+NC LAP   +  S K+A+E A  
Sbjct: 79  VNRAELTADMRRIDAVRRDVGMVFQHFNLFPHLTILENCTLAPVWSKKYSPKEAKEVAMS 138

Query: 139 YLSKVGIESQAHKYPSQLSGGQQQRVAIARALCMKPRIMLFDEPTSALDPEMVAEVLDVL 198
           YL +V I  QA+KYPSQLSGGQQQRVAIARALCM P++MLFDEPTSALDPEMV EVLD +
Sbjct: 139 YLERVRIPEQANKYPSQLSGGQQQRVAIARALCMGPKVMLFDEPTSALDPEMVKEVLDTM 198

Query: 199 VQLAGTGMTMLCVTHEMGFARQVAERVLFLEGGQIIEDSPPQVFFNQPRTERAKAFLAQI 258
           V LA  GMTML VTHEM FARQVA RV+F++ G I+E +PPQ FF  P+ ER + FL+Q+
Sbjct: 199 VSLADDGMTMLSVTHEMNFARQVANRVIFMDRGAIVEQAPPQEFFGNPKHERTRLFLSQL 258

Query: 259 LH 260
           LH
Sbjct: 259 LH 260