Pairwise Alignments

Query, 236 a.a., L-lysine and D-lysine ABC transporter, permease component 2 (from data) from Pseudomonas putida KT2440

Subject, 237 a.a., amino acid ABC transporter permease from Pseudomonas simiae WCS417

 Score =  127 bits (318), Expect = 2e-34
 Identities = 86/230 (37%), Positives = 128/230 (55%), Gaps = 8/230 (3%)

Query: 14  DLLERYGPRFI-------DGLLVTAKLVAISFSLGAVLGLLLALARLSRSLVLQRMAAGY 66
           +L ++YG  ++        G+ +T  L  IS  LG  L + LALAR+S  + L+     Y
Sbjct: 3   ELFQQYGLAYLFSDGAGLSGVAMTLWLFIISVVLGFFLSIPLALARVSEHVWLRWPVEVY 62

Query: 67  VYFFRGSPLLAQLFLLYYGLGSLKGFWQDVGLWWFFRDAWFCTLLAFTLNTAAYQAEIFR 126
            Y FRG+PL  QL + Y GL SL+    +  L  FFR+A  CTLLAF LNT AY  EIF 
Sbjct: 63  TYLFRGTPLYIQLLICYTGLYSLEIVQDNALLNQFFRNALNCTLLAFVLNTCAYTVEIFA 122

Query: 127 GSLMAVAPGQHEAARALNLKRSTTFFKVILPQSLLVAIGPLGNELILMIKASAIASLVTI 186
           G++  +  G+ EAARA  L        V++P +L  A+    NE+ILM+ A+++A   T+
Sbjct: 123 GAIRNIPHGEIEAARAYGLHGWRLNLFVVVPAALRRALPAYSNEMILMLHATSLAFTATV 182

Query: 187 YDLMGVTKLAFSRSF-DFQIYLWAAVLYLVIVELVRRLLKHLEARLGRHL 235
            D++ V + A + +F  FQ +  AA+LY+++   +  L +  E R  R L
Sbjct: 183 ADILKVARDANAETFLTFQAFGIAALLYMLLSFALVGLFRLAERRWMRFL 232