Pairwise Alignments

Query, 236 a.a., L-lysine and D-lysine ABC transporter, permease component 2 (from data) from Pseudomonas putida KT2440

Subject, 229 a.a., ABC transporter permease from Pseudomonas simiae WCS417

 Score =  159 bits (401), Expect = 6e-44
 Identities = 83/209 (39%), Positives = 131/209 (62%), Gaps = 2/209 (0%)

Query: 21  PRFIDGLLVTAKLVAISFSLGAVLGLLLALARLSRSLVLQRMAAGYVYFFRGSPLLAQLF 80
           P+   G ++T +LVAI+   G +L + L +AR SR   +  +   Y++FFRG+PLL QLF
Sbjct: 11  PKLAQGAILTLELVAIAVIAGLLLAIPLGIARSSRRWYVSALPYAYIFFFRGTPLLVQLF 70

Query: 81  LLYYGLGSLKGFWQDVGLWWFFRDAWFCTLLAFTLNTAAYQAEIFRGSLMAVAPGQHEAA 140
           L+YYGL       +   +W + RD ++C     TL+TAAY AEI RG++ A+ PG+ EAA
Sbjct: 71  LVYYGLAQFDSVRESF-MWPYLRDPFWCATATMTLHTAAYIAEILRGAIQAIPPGEIEAA 129

Query: 141 RALNLKRSTTFFKVILPQSLLVAIGPLGNELILMIKASAIASLVTIYDLMGVTKLAFSRS 200
           RAL + +  T F +ILP++  + +    NE+ILM+KASA+AS VT+ +L G+ +   +R+
Sbjct: 130 RALGMSKPKTLFYIILPRASRIGLPAYSNEVILMLKASALASTVTLLELTGMARTIIART 189

Query: 201 F-DFQIYLWAAVLYLVIVELVRRLLKHLE 228
           +   +I+  A + YL++  ++ R  K LE
Sbjct: 190 YLPVEIFFAAGLFYLLMAYVLVRGFKLLE 218