Pairwise Alignments

Query, 236 a.a., L-lysine and D-lysine ABC transporter, permease component 2 (from data) from Pseudomonas putida KT2440

Subject, 232 a.a., nickel permease from Pseudomonas simiae WCS417

 Score =  130 bits (328), Expect = 2e-35
 Identities = 76/222 (34%), Positives = 120/222 (54%), Gaps = 4/222 (1%)

Query: 13  PDLLERYGPRFIDGLLVTAKLVAISFSLGAVLGLLLALARLSRSLVLQRMAAGYVYFFRG 72
           PD +  Y      GL  T  L+ IS  LG  L +L+ALARLSR   L R A  Y    RG
Sbjct: 2   PDWISYYAGLIAKGLQTTLSLLVISALLGFALAVLVALARLSRRKWLARGAQAYTSVLRG 61

Query: 73  SPLLAQLFLLYYGLGSLKGFWQDVG---LWWFFRDAWFCTLLAFTLNTAAYQAEIFRGSL 129
           +PLL Q+++ YYGLGSL   +  +    LW + RD ++  + A  L+  AY  E+ RG L
Sbjct: 62  TPLLIQIYIFYYGLGSLFAQFPMIRGSFLWPYLRDGYWYIVFALVLSVGAYVGEVIRGGL 121

Query: 130 MAVAPGQHEAARALNLKRSTTFFKVILPQSLLVAIGPLGNELILMIKASAIASLVTIYDL 189
           +AV  G+ EAA A  +       +V LP+++ + +  L  E ++++K++A+AS + + DL
Sbjct: 122 LAVPKGEMEAASAFGMTPRQALLRVRLPRAMRLLLPTLAGETVMLLKSTALASTIAVVDL 181

Query: 190 MGVTKLAFSRSFD-FQIYLWAAVLYLVIVELVRRLLKHLEAR 230
           +G   +  +++   +Q  L  A +YL +  L+  +    E R
Sbjct: 182 LGAANVVRAQTLQIYQPLLLVAAVYLCLTFLIEGVYAIAERR 223