Pairwise Alignments

Query, 236 a.a., L-lysine and D-lysine ABC transporter, permease component 2 (from data) from Pseudomonas putida KT2440

Subject, 221 a.a., amino acid ABC transporter permease from Pseudomonas simiae WCS417

 Score =  133 bits (335), Expect = 2e-36
 Identities = 80/215 (37%), Positives = 123/215 (57%), Gaps = 11/215 (5%)

Query: 21  PRFIDGLLVTAKLVAISFSLGAVLGLLLALARLSRSLVLQRMAAGYVYFFRGSPLLAQLF 80
           P  + G   T  L       G +LG  LAL RLSR  ++  +A  YV FFRG+PLL QLF
Sbjct: 13  PFLLKGAYYTVILSLGGMFFGLLLGFGLALMRLSRFKLVSWLARVYVSFFRGTPLLVQLF 72

Query: 81  LLYYGLGSLKGFWQDVGLWWFFRDAWFCTLLAFTLNTAAYQAEIFRGSLMAVAPGQHEAA 140
           L+YYGL         VG+     D     ++ F+LN AAY  EI R ++ ++  GQ EAA
Sbjct: 73  LIYYGL-------PQVGIEL---DPIPAAMIGFSLNMAAYACEILRAAIGSIERGQWEAA 122

Query: 141 RALNLKRSTTFFKVILPQSLLVAIGPLGNELILMIKASAIASLVTIYDLMGVTKLAFSRS 200
            ++ + R+ T  + ILPQ++  A+ PLGN  I ++K +A+A+ + + +L    +L  +R+
Sbjct: 123 ASIGMTRAQTLRRAILPQAMRTALPPLGNSFISLVKDTALAATIQVPELFRQAQLVSART 182

Query: 201 FD-FQIYLWAAVLYLVIVELVRRLLKHLEARLGRH 234
           F+ F +YL AA++Y ++  ++  L   LE R+ RH
Sbjct: 183 FEIFTMYLSAALIYWILASILAHLQNRLEDRVNRH 217