Pairwise Alignments

Query, 236 a.a., L-lysine and D-lysine ABC transporter, permease component 2 (from data) from Pseudomonas putida KT2440

Subject, 236 a.a., amino acid ABC transporter permease from Pseudomonas simiae WCS417

 Score =  126 bits (316), Expect = 4e-34
 Identities = 81/225 (36%), Positives = 127/225 (56%), Gaps = 8/225 (3%)

Query: 14  DLLERYGPRF-------IDGLLVTAKLVAISFSLGAVLGLLLALARLSRSLVLQRMAAGY 66
           +LL+ Y   F       I GL +T  L+  +  +G ++ + L++AR+SR  +++     Y
Sbjct: 3   ELLQEYWRPFLYSDGQHITGLAMTMWLLTTALVIGFLVSIPLSIARVSRKRLVRWPVQFY 62

Query: 67  VYFFRGSPLLAQLFLLYYGLGSLKGFWQDVGLWWFFRDAWFCTLLAFTLNTAAYQAEIFR 126
            Y FRG+PL  QL + Y G+ SL    +   L  FFRDA  CT+LAF LNT AY  EIF 
Sbjct: 63  TYLFRGTPLYIQLLICYTGIYSLAAVREQPLLDAFFRDAMNCTILAFALNTCAYTTEIFA 122

Query: 127 GSLMAVAPGQHEAARALNLKRSTTFFKVILPQSLLVAIGPLGNELILMIKASAIASLVTI 186
           G++ ++A G+ EAA+A  L     +  VI+P +L  ++    NE+ILM+ ++ +A   TI
Sbjct: 123 GAIRSMAHGEVEAAKAYGLSGWKLYAYVIMPSALRRSLPYYSNEVILMLHSTTVAFTATI 182

Query: 187 YDLMGVTKLAFSRSF-DFQIYLWAAVLYLVIVELVRRLLKHLEAR 230
            D++ V + A S +F  FQ +  AA++YL +   +  L +  E R
Sbjct: 183 PDILKVARDANSATFMTFQSFGIAALIYLTVTFALVGLFRLAERR 227