Pairwise Alignments

Query, 236 a.a., L-lysine and D-lysine ABC transporter, permease component 2 (from data) from Pseudomonas putida KT2440

Subject, 222 a.a., ABC transporter, permease protein (cluster 3, basic aa/glutamine/opines) from Variovorax sp. SCN45

 Score =  125 bits (315), Expect = 5e-34
 Identities = 74/213 (34%), Positives = 122/213 (57%), Gaps = 12/213 (5%)

Query: 21  PRFIDGLLVTAKLVAISFSLGAVLGLLLALARLS-RSLVLQRMAAGYVYFFRGSPLLAQL 79
           P  + G LVT ++ A + +LG VLGLL+ + RL+ +   +      YV   RG+PLL QL
Sbjct: 13  PDLLRGALVTVEITACALALGCVLGLLVGIGRLNPKRRWIYGACTAYVAAIRGTPLLVQL 72

Query: 80  FLLYYGLGSLKGFWQDVGLWWFFRDAWFCTLLAFTLNTAAYQAEIFRGSLMAVAPGQHEA 139
           F+L++GL            +     A+ C +L   + + AY +EI RG++ ++  GQ  A
Sbjct: 73  FILFFGLPH----------FGILLPAFLCGVLGLGVYSGAYVSEIVRGAIQSIDKGQTMA 122

Query: 140 ARALNLKRSTTFFKVILPQSLLVAIGPLGNELILMIKASAIASLVTIYDLMGVTKLAFSR 199
           A++L +       +++LPQ+++  I PLGNE I +IK SA+ SL+TI+D+M   +   S 
Sbjct: 123 AQSLGMTPGVAMRQIVLPQAVVRMIPPLGNEFIALIKNSALVSLLTIHDVMHEGQKIISV 182

Query: 200 SF-DFQIYLWAAVLYLVIVELVRRLLKHLEARL 231
           S+   ++YL  AV+Y V+   +  +L+H E +L
Sbjct: 183 SYRSLEVYLAIAVVYFVLTGTMTLILRHFEQKL 215