Pairwise Alignments

Query, 239 a.a., L-lysine and D-lysine ABC transporter, permease component 1 (from data) from Pseudomonas putida KT2440

Subject, 233 a.a., amino acid ABC transporter permease from Pseudomonas simiae WCS417

 Score =  160 bits (404), Expect = 3e-44
 Identities = 91/223 (40%), Positives = 130/223 (58%), Gaps = 1/223 (0%)

Query: 14  GWGQALLAGALVTVSLALACLPIGLPLGLVVALAARSRKRLPRAWATTFSTVFRGLPELL 73
           G+G  L  GA +T+ LA   L + L LGL+ A A  S  +  R  AT ++T+ R +P+L+
Sbjct: 9   GYGPMLAQGAWMTLKLAFLALALSLALGLIAAAAKLSSAKWLRVPATLYTTLIRSVPDLV 68

Query: 74  TLLIIYYGCQIAAQKILAAMGYQGEFLINTFLAAMIAFSLVFAAFSSEIWLAAFKTLPKG 133
            +L+I+Y  Q+    +    G+   F I+ F A +I    ++ A+ +E +  A  ++P G
Sbjct: 69  LILLIFYSLQLWLNDLSEVFGWD-YFEIDPFTAGVITLGFIYGAYFTENFRGAILSVPVG 127

Query: 134 QLEACSALGLSKRTGFFKVLLPQLTRIALPGLSNNWLSLLKDTSLVSTISLVDLMRQTNL 193
           QLEA +A GLS+   F  VL PQL R ALPGL NNWL LLK T+LVS I L DL++    
Sbjct: 128 QLEAATAYGLSRWQRFHLVLFPQLMRFALPGLGNNWLVLLKSTALVSIIGLSDLVKAAQN 187

Query: 194 AVSVTKEPMFFYGVACLGYLLFAALSGRVFAYIERRSNRHLQG 236
           A   T EP++F  +A L YL+   LS RV   +ERR N  ++G
Sbjct: 188 AGKTTNEPLYFLILAGLMYLVITTLSNRVLKRLERRYNLGIKG 230