Pairwise Alignments

Query, 239 a.a., L-lysine and D-lysine ABC transporter, permease component 1 (from data) from Pseudomonas putida KT2440

Subject, 234 a.a., ABC transporter permease from Pseudomonas simiae WCS417

 Score =  138 bits (347), Expect = 1e-37
 Identities = 81/226 (35%), Positives = 124/226 (54%), Gaps = 1/226 (0%)

Query: 7   LLSFASGGWGQALLAGALVTVSLALACLPIGLPLGLVVALAARSRKRLPRAWATTFSTVF 66
           LLSF   GWG ALL G  +T+ ++     +G+ +GLVVA    S  R        ++TVF
Sbjct: 4   LLSFDEQGWGNALLKGLWMTLQISAGSFAVGVLIGLVVACLKLSAPRPIALLMRGYTTVF 63

Query: 67  RGLPELLTLLIIYYGCQIAAQKILAAMGYQGEFLINTFLAAMIAFSLVFAAFSSEIWLAA 126
           R +PELL +L++YY   +    ++  MG+  +  I+  L A++   LV  A++SEI+ AA
Sbjct: 64  RAVPELLLILLLYYAGSMGLNALMLWMGF-AQMNISGPLVAILVLGLVQGAYASEIFRAA 122

Query: 127 FKTLPKGQLEACSALGLSKRTGFFKVLLPQLTRIALPGLSNNWLSLLKDTSLVSTISLVD 186
              +P GQ+EA  A GLS    F +V LP +   AL G+SN W++L+KD++L+S +   +
Sbjct: 123 ILAIPHGQIEAARAFGLSGFGLFRRVTLPIMAPFALAGMSNLWINLIKDSALISVVGTNE 182

Query: 187 LMRQTNLAVSVTKEPMFFYGVACLGYLLFAALSGRVFAYIERRSNR 232
           L+     A   T++ + FY  A   Y L    S  +   +ERR  R
Sbjct: 183 LLYTAKQAAGSTRQYLLFYLTAAALYYLVTLASNYLSGRLERRIRR 228