Pairwise Alignments

Query, 239 a.a., L-lysine and D-lysine ABC transporter, permease component 1 (from data) from Pseudomonas putida KT2440

Subject, 242 a.a., amino acid ABC transporter permease from Pseudomonas simiae WCS417

 Score =  133 bits (335), Expect = 3e-36
 Identities = 80/229 (34%), Positives = 126/229 (55%), Gaps = 1/229 (0%)

Query: 1   MLDQLSLLSFASGGWGQALLAGALVTVSLALACLPIGLPLGLVVALAARSRKRLPRAWAT 60
           +L  L L + +  G+G  LL G  +T+ L++  L + + LGL+ A A  S     R  A 
Sbjct: 5   LLQTLGLSALSLKGFGPLLLQGTWMTIKLSVLSLAVSVLLGLLGASAKLSSLPFLRIPAQ 64

Query: 61  TFSTVFRGLPELLTLLIIYYGCQIAAQKILAAMGYQGEFLINTFLAAMIAFSLVFAAFSS 120
            ++T+ RG+P+L+ +L+I+Y  Q     +   M ++    I+ F A +I    ++ A+ +
Sbjct: 65  LYTTLIRGVPDLVLMLLIFYSLQTWLTGLTDFMEWE-YIEIDPFSAGVITLGFIYGAYFT 123

Query: 121 EIWLAAFKTLPKGQLEACSALGLSKRTGFFKVLLPQLTRIALPGLSNNWLSLLKDTSLVS 180
           E +  A   +P+GQLEA +A GL +   F  V  PQ+ R ALPG+ NNW+ +LK T+LVS
Sbjct: 124 ETFRGAILAVPRGQLEAATAYGLKRGQRFRYVTFPQMMRFALPGIGNNWMVMLKATALVS 183

Query: 181 TISLVDLMRQTNLAVSVTKEPMFFYGVACLGYLLFAALSGRVFAYIERR 229
            I L DL++    A   T +  +F  +A L YLL  + S  V   +ERR
Sbjct: 184 IIGLADLVKAAQDAGKSTYQLFYFLVLAALIYLLITSASNFVLRRLERR 232