Pairwise Alignments

Query, 239 a.a., L-lysine and D-lysine ABC transporter, permease component 1 (from data) from Pseudomonas putida KT2440

Subject, 230 a.a., Amino acid ABC transporter, permease protein from Pseudomonas putida KT2440

 Score =  159 bits (403), Expect = 3e-44
 Identities = 96/220 (43%), Positives = 137/220 (62%), Gaps = 3/220 (1%)

Query: 14  GWGQALLAGALVTVSLALACLPIGLPLGLVVALAARSRKRLPRAWATTF-STVFRGLPEL 72
           G+G A++AG L+TV LAL  L +GL LGL+ ALA  S  + P  W   F ST+ RG+PEL
Sbjct: 7   GFGPAMMAGTLMTVKLALCALLLGLVLGLLGALAKTSPFK-PLQWLGGFYSTLVRGVPEL 65

Query: 73  LTLLIIYYGCQIAAQKILAAMGYQGEFLINTFLAAMIAFSLVFAAFSSEIWLAAFKTLPK 132
           L +L+IY+G       +  A+   G   ++ F A +IA  L F A+++E++  A   +PK
Sbjct: 66  LWVLLIYFGTVGLMNSLGEALNMPG-LELSAFAAGVIALGLCFGAYATEVFRGAILAIPK 124

Query: 133 GQLEACSALGLSKRTGFFKVLLPQLTRIALPGLSNNWLSLLKDTSLVSTISLVDLMRQTN 192
           G  EA  ALGLSK     +++LPQ+ RIALPGL N ++ L+KDT+LVS I L ++MR + 
Sbjct: 125 GHREAGLALGLSKGRILSRIILPQMWRIALPGLGNLFMILMKDTALVSVIGLEEIMRHSQ 184

Query: 193 LAVSVTKEPMFFYGVACLGYLLFAALSGRVFAYIERRSNR 232
           + V+VTKEP  FY VA   YL    L+     ++E+R+ R
Sbjct: 185 IGVTVTKEPFTFYMVAACIYLGLTVLAMTGMHFMEKRAAR 224