Pairwise Alignments

Query, 239 a.a., L-lysine and D-lysine ABC transporter, permease component 1 (from data) from Pseudomonas putida KT2440

Subject, 221 a.a., amino acid ABC transporter permease from Dickeya dianthicola ME23

 Score =  116 bits (290), Expect = 4e-31
 Identities = 76/228 (33%), Positives = 119/228 (52%), Gaps = 12/228 (5%)

Query: 6   SLLSFASGGWGQALLAGALVTVSLALACLPIGLPLGLVVALAARSRKRLPRAWATTFSTV 65
           S L   +  +   L AG   TV LA+    +GL +G++VAL      +  +     +  V
Sbjct: 3   SWLQLMADSFWSLLSAGLTFTVPLAILSFILGLMVGVLVALLRLYGPKPLKRICDFYVWV 62

Query: 66  FRGLPELLTLLIIYYGCQIAAQKILAAMGYQGEFLINTFLAAMIAFSLVFAAFSSEIWLA 125
            RG P L+ L +I+YG   A+              ++ F AA+I FSL   A+SSEI   
Sbjct: 63  IRGTPLLVQLFLIFYGLPSAS------------ITLDAFPAALIGFSLNVGAYSSEIVRG 110

Query: 126 AFKTLPKGQLEACSALGLSKRTGFFKVLLPQLTRIALPGLSNNWLSLLKDTSLVSTISLV 185
           A  ++P+GQ  A  +LG+S       V++PQ   ++LP L+N ++SL+KDTSL + I++ 
Sbjct: 111 AILSVPRGQWNAAYSLGMSGAQAIRWVIVPQSVFVSLPPLANTFISLVKDTSLAAVITVP 170

Query: 186 DLMRQTNLAVSVTKEPMFFYGVACLGYLLFAALSGRVFAYIERRSNRH 233
           ++       VSVT EP+  Y  A L YLLF+ +  ++   +E+   RH
Sbjct: 171 EMFLAAQRIVSVTYEPLILYIEAALIYLLFSTVLSKLQTRLEKYYQRH 218