Pairwise Alignments

Query, 250 a.a., L-lysine and D-lysine ABC transporter, substrate-binding component (from data) from Pseudomonas putida KT2440

Subject, 253 a.a., amino acid ABC transporter from Pseudomonas simiae WCS417

 Score =  336 bits (862), Expect = 2e-97
 Identities = 166/235 (70%), Positives = 195/235 (82%)

Query: 15  LAGAASAETLRFATEGAYPPFNYVDADNKLHGFDVDITHALCEQMKVECTLVAQDWEGII 74
           +AGAA AETLR A+EGAYPPFNYVD++N+LHGFD+DI +ALCE+MKV CT V QDWEG+I
Sbjct: 19  VAGAAHAETLRIASEGAYPPFNYVDSNNRLHGFDIDIANALCERMKVNCTFVTQDWEGMI 78

Query: 75  PALMARKYDAIVASMIDTEERRKKIAFTDHYYRTPLTVAVAKDSKIDSAQTDFVGYTVGA 134
           PAL+A+KYDAIVASM  TEER+KKIAFT+ YYRTPL+VAVA DS I  AQT+F G TVGA
Sbjct: 79  PALLAKKYDAIVASMNVTEERKKKIAFTNRYYRTPLSVAVAHDSGISDAQTNFKGLTVGA 138

Query: 135 QSSSTQAIYAEDVYGKAGADVKLYPTMDEANADLAAGRLDGVIADKFPLHEWMNKNGGDC 194
           QS STQAIYAE+ Y +AGA VKLYP+ DEA +DLAAGRLDGVIADK+PL  W+   G DC
Sbjct: 139 QSYSTQAIYAEEHYAEAGATVKLYPSQDEAASDLAAGRLDGVIADKYPLLAWVAGAGKDC 198

Query: 195 CKILGDVADTKADAAIAVRKDDEALRQRLNTALQQIVANGTYQKIASKYFAFDIY 249
           C  LGD+  T  DAAIAVR+ D  LR+RLN AL +IVA+GTY+ I+ +YFAFDIY
Sbjct: 199 CTFLGDIDGTNTDAAIAVRQGDVELRERLNKALDEIVADGTYKNISRRYFAFDIY 253