Pairwise Alignments

Query, 250 a.a., L-lysine and D-lysine ABC transporter, substrate-binding component (from data) from Pseudomonas putida KT2440

Subject, 258 a.a., ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

 Score =  168 bits (426), Expect = 9e-47
 Identities = 100/255 (39%), Positives = 146/255 (57%), Gaps = 8/255 (3%)

Query: 3   KSMALLGACAL-LLAGA---ASAETLRFATEGAYPPFNYVDADNKLHGFDVDITHALCEQ 58
           K  +L+   AL LLA +   A+ +TLR   E AYPPF     + K+ GFD DI +ALC Q
Sbjct: 2   KKRSLITVLALGLLASSHAMAAEKTLRIGIEAAYPPFASKTEEGKIVGFDYDIGNALCAQ 61

Query: 59  MKVECTLVAQDWEGIIPALMARKYDAIVASMIDTEERRKKIAFTDHYYRTPLTVAVAKDS 118
           MKV+C  V  +++G+IP+L  +K D  ++SM   E+R+K + FT  YY T   + + + +
Sbjct: 62  MKVKCVWVEGEFDGLIPSLKVKKIDMALSSMTINEDRKKSVDFTHKYYFTSSRLVMKEGA 121

Query: 119 KIDSAQTDFVGYTVGAQSSSTQAIYAEDVYGKAGADVKLYPTMDEANADLAAGRLDGVIA 178
            +D       G T+G Q ++T   YA +V+   G +VK Y   +E   DLAAGRLD + A
Sbjct: 122 VVDDQYASLKGKTIGVQRATTTDRYATEVFEPKGINVKRYSNNEEIYMDLAAGRLDAIFA 181

Query: 179 DKFPLHEWMNKNGGDCCKILG-DVADTK---ADAAIAVRKDDEALRQRLNTALQQIVANG 234
           D  PL++++    G     +G ++ D K     A IAVRK +  L  +LN A+  I A+G
Sbjct: 182 DTIPLNDFLQMPRGKGYAFVGPELKDPKYVGEGAGIAVRKGNTELVGQLNAAIDGIRASG 241

Query: 235 TYQKIASKYFAFDIY 249
            YQKI+ +YF  DIY
Sbjct: 242 EYQKISQQYFKSDIY 256