Pairwise Alignments

Query, 250 a.a., L-lysine and D-lysine ABC transporter, substrate-binding component (from data) from Pseudomonas putida KT2440

Subject, 243 a.a., Arginine ABC transporter, periplasmic arginine-binding protein ArtJ from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  162 bits (409), Expect = 8e-45
 Identities = 90/244 (36%), Positives = 133/244 (54%), Gaps = 6/244 (2%)

Query: 3   KSMALLGACALLLAGAASAETLRFATEGAYPPFNYVDADNKLHGFDVDITHALCEQMKVE 62
           K + L    A    G+ +AE + F     YPPF  +DA NK+ GFD+D+  ALC+QM+ E
Sbjct: 2   KKLVLAALLASFATGSIAAEKINFGVSATYPPFESLDASNKIVGFDIDLATALCKQMQAE 61

Query: 63  CTLVAQDWEGIIPALMARKYDAIVASMIDTEERRKKIAFTDHYYRTPLTVAVAKDSKIDS 122
           CT     ++ +IPAL  RKYDA+++ M  T ER K++AF++ YY     V   KD+    
Sbjct: 62  CTFTNHAFDSLIPALKFRKYDAVISGMDITPERSKQVAFSNPYYANSALVIAKKDTY--K 119

Query: 123 AQTDFVGYTVGAQSSSTQAIYAEDVYGKAGADVKLYPTMDEANADLAAGRLDGVIADKFP 182
             TD  G  +G ++ +T   Y +D + +       Y +   A  DL  GR+DGV  D   
Sbjct: 120 TFTDLKGKRIGMENGTTHQKYLQDKHPE--VKTVAYDSYQNAIIDLKNGRIDGVFGDTAV 177

Query: 183 LHEWMNKNG--GDCCKILGDVADTKADAAIAVRKDDEALRQRLNTALQQIVANGTYQKIA 240
           ++EW+  N   G   + + D         IAVR D++AL ++LN AL  I A+GTYQKI+
Sbjct: 178 VNEWLKTNPQLGPATEKVTDPQYFGTGLGIAVRPDNKALLEKLNNALAAIKADGTYQKIS 237

Query: 241 SKYF 244
            ++F
Sbjct: 238 DQWF 241