Pairwise Alignments

Query, 250 a.a., L-lysine and D-lysine ABC transporter, substrate-binding component (from data) from Pseudomonas putida KT2440

Subject, 260 a.a., Histidine ABC transporter, histidine-binding periplasmic protein precursor HisJ (TC 3.A.1.3.1) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  149 bits (377), Expect = 4e-41
 Identities = 84/239 (35%), Positives = 130/239 (54%), Gaps = 5/239 (2%)

Query: 16  AGAASAETLRFATEGAYPPFNYVDADNKLHGFDVDITHALCEQMKVECTLVAQDWEGIIP 75
           A AA  + +R  T+  Y PF   +A  +L GFD+D+   LC+++  +CT V    + +IP
Sbjct: 20  AFAAIPQKIRIGTDPTYAPFESKNAQGELVGFDIDLAKELCKRINTQCTFVENPLDALIP 79

Query: 76  ALMARKYDAIVASMIDTEERRKKIAFTDHYYRTPLTVAVAKDSKIDSAQTDFVGYTVGAQ 135
           +L A+K DAI++S+  TE+R+++IAFTD  Y     + VAK+S I        G  VG  
Sbjct: 80  SLKAKKIDAIMSSLSITEKRQQEIAFTDKLYAADSRLVVAKNSDIQPTVASLKGKRVGVL 139

Query: 136 SSSTQAIYAEDVYGKAGADVKLYPTMDEANADLAAGRLDGVIADKFPLHE-WMNKNGGDC 194
             +TQ  +  + +   G ++  Y   D   +DL AGR+D    D+    E ++ +  G  
Sbjct: 140 QGTTQETFGNEHWAPKGIEIVSYQGQDNIYSDLTAGRIDAAFQDEVAASEGFLKQPVGKD 199

Query: 195 CKILGD-VADTK---ADAAIAVRKDDEALRQRLNTALQQIVANGTYQKIASKYFAFDIY 249
            K  G  V D K       + +RK+D  LR+ LN A  ++ A+GTY+K+A KYF FD+Y
Sbjct: 200 YKFGGPAVKDEKLFGVGTGMGLRKEDNELREALNKAFAEMRADGTYEKLAKKYFDFDVY 258