Pairwise Alignments

Query, 250 a.a., L-lysine and D-lysine ABC transporter, substrate-binding component (from data) from Pseudomonas putida KT2440

Subject, 259 a.a., transporter substrate-binding domain-containing protein from Dickeya dianthicola ME23

 Score =  147 bits (370), Expect = 3e-40
 Identities = 89/257 (34%), Positives = 132/257 (51%), Gaps = 8/257 (3%)

Query: 1   MNKSMALLGACALLLAGAASAET---LRFATEGAYPPFNYVDADNKLHGFDVDITHALCE 57
           M K +  L    +  AG+A AE    ++  T+  Y PF   DA  +L GFD+D+   LC+
Sbjct: 1   MKKMLKFLPLALVFAAGSALAEVPKNIKIGTDPTYAPFESKDASGQLVGFDIDLAKELCK 60

Query: 58  QMKVECTLVAQDWEGIIPALMARKYDAIVASMIDTEERRKKIAFTDHYYRTPLTVAVAKD 117
           +++  CT V  D++ +IP+L A+K DAI++S+  TE+R+++IAFTD  Y     +   K 
Sbjct: 61  RIQANCTFVESDFDALIPSLKAKKIDAIISSLSITEKRQQEIAFTDKLYAANARLIAKKG 120

Query: 118 SKIDSAQTDFVGYTVGAQSSSTQAIYAEDVYGKAGADVKLYPTMDEANADLAAGRLDGVI 177
           S I        G  VG   +STQ  YA   +   G DV  Y   D   ADL AGR+D   
Sbjct: 121 SPILPTLDALKGKRVGVLQASTQESYANQYWQPKGVDVVAYQNQDLIYADLTAGRIDAAF 180

Query: 178 ADKFPLHE-WMNKNGGDCCKILGD-VADTK---ADAAIAVRKDDEALRQRLNTALQQIVA 232
            D+    E ++ +  G      G  V D K       + +RK++  L+  L+ A   +  
Sbjct: 181 QDEVAGSEGFLKQAAGKEYAFAGPAVKDDKLFGVGTGMGLRKNETELKAALDKAFATLRK 240

Query: 233 NGTYQKIASKYFAFDIY 249
           +GTY K+A KYF FD+Y
Sbjct: 241 DGTYDKLAKKYFDFDVY 257