Pairwise Alignments

Query, 250 a.a., L-lysine and D-lysine ABC transporter, substrate-binding component (from data) from Pseudomonas putida KT2440

Subject, 258 a.a., ABC transporter substrate-binding protein from Dickeya dianthicola ME23

 Score =  141 bits (356), Expect = 1e-38
 Identities = 89/255 (34%), Positives = 135/255 (52%), Gaps = 7/255 (2%)

Query: 1   MNKSMALLGACALLLAGAASAET-LRFATEGAYPPFNYVDADNKLHGFDVDITHALCEQM 59
           M K   L+ +  LL +  A A+T LRF  E  YPPF   +A  +L GFD+D+ +A+C+  
Sbjct: 1   MKKLSMLMLSLGLLSSSVALAQTELRFGLEAEYPPFESKNAKGRLEGFDIDLGNAICKAG 60

Query: 60  KVECTLVAQDWEGIIPALMARKYDAIVASMIDTEERRKKIAFTDHYYRTPLTVAVAKDSK 119
             +CT V   ++ +IPAL A+K+DAI ++M  TE+RR+ I FT   YR P  +    D+ 
Sbjct: 61  NFQCTWVETSFDALIPALQAKKFDAINSAMNITEKRREAIDFTPPIYRIPTQLVGKPDTG 120

Query: 120 IDSAQTDFVGYTVGAQSSSTQAIYAEDVYGKAGADVKLYPTMDEANADLAAGRLDG-VIA 178
           +        G  +G    S Q +YA+  +   G  V  Y   + A  DLAAGRLDG ++ 
Sbjct: 121 LAPTPDALKGKNIGVLQGSIQEVYAKAHWEPKGVTVTSYKDQNLAYDDLAAGRLDGTLVM 180

Query: 179 DKFPLHEWMNKNGGDCCKILG----DVADTKADAAIAVRKDDEALRQRLNTALQQIVANG 234
                  +++K  G     +G    D A   +     +RK D AL+  L+ A++Q+  +G
Sbjct: 181 AAAGQSGFLDKPEGKGFAFIGGPVEDTAILGSGIGFGLRKSDAALKAELDKAIKQVKDDG 240

Query: 235 TYQKIASKYF-AFDI 248
           T +K+A KYF  FD+
Sbjct: 241 TVEKLAKKYFPGFDV 255