Pairwise Alignments

Query, 250 a.a., L-lysine and D-lysine ABC transporter, substrate-binding component (from data) from Pseudomonas putida KT2440

Subject, 243 a.a., arginine ABC transporter substrate-binding protein from Dickeya dianthicola ME23

 Score =  149 bits (376), Expect = 5e-41
 Identities = 91/246 (36%), Positives = 131/246 (53%), Gaps = 19/246 (7%)

Query: 6   ALLGACALLLAGAASAETLRFATEGAYPPFNYVDADNKLHGFDVDITHALCEQMKVECTL 65
           AL G  +L    A +AET+RFATE +YPPF  VDA N++ GFD+D+ +ALC+Q++  CT 
Sbjct: 8   ALFGGLSL---SAGAAETIRFATEASYPPFESVDASNQIVGFDIDLANALCKQIQAACTF 64

Query: 66  VAQDWEGIIPALMARKYDAIVASMIDTEERRKKIAFTDHYYRTPLTVAVAKDSKIDSAQT 125
             Q ++ +IP L  R+YDA++A M  T ER++++AFT  YY         K    D A  
Sbjct: 65  SNQAFDSLIPGLKFRRYDAVIAGMDITPERQQQVAFTQPYYENSALFIAQKGKLADIAA- 123

Query: 126 DFVGYTVGAQSSSTQAIYAEDVYGKAGADVKLYPTMDEANADLAAGRLDGVIADKFPLHE 185
              G  VG Q+ +T   +  D +      V  Y +   A  DL  GRLD V  D   ++E
Sbjct: 124 -LKGKRVGVQNGTTHQKFLLDKH--KDITVVPYDSYQNAALDLKNGRLDAVFGDTAVVNE 180

Query: 186 WMNKNGGDCCKILGDVADTKAD-------AAIAVRKDDEALRQRLNTALQQIVANGTYQK 238
           W+ +N       L  V D   D         IA+R++++ L ++ N AL  I  +GTYQ 
Sbjct: 181 WLKQNPN-----LASVGDKVTDKDYFGIGLGIAMRQNNDELVKKFNDALNNIKQDGTYQT 235

Query: 239 IASKYF 244
           I  K+F
Sbjct: 236 IYKKWF 241