Pairwise Alignments

Query, 250 a.a., L-lysine and D-lysine ABC transporter, substrate-binding component (from data) from Pseudomonas putida KT2440

Subject, 246 a.a., arginine ABC transporter substrate-binding protein from Dickeya dianthicola ME23

 Score =  155 bits (392), Expect = 7e-43
 Identities = 92/249 (36%), Positives = 138/249 (55%), Gaps = 20/249 (8%)

Query: 5   MALLGACALLLAGAASAETLRFATEGAYPPFNYVDADNKLHGFDVDITHALCEQMKVECT 64
           +A L A A +   A +A+T+RFA    YPPF  +DA N++ GFD+D+ +ALC+Q++  C+
Sbjct: 6   LAALLASATMTFNATAADTIRFAASATYPPFESLDAGNQIVGFDIDLANALCKQLQATCS 65

Query: 65  LVAQDWEGIIPALMARKYDAIVASMIDTEERRKKIAFTDHYYRTPLTVAVAKDSKIDSAQ 124
              Q ++ +IPAL  R+YDA+++ M  T ER K++AFT  YY     + +A+  K  S  
Sbjct: 66  FTNQAFDSLIPALKFRRYDAVISGMDITPERSKQVAFTQPYYANS-AIVIAQKGKFHSL- 123

Query: 125 TDFVGYTVGAQSSSTQAIYAEDVYGKAGADVKLYPTMDEANA--DLAAGRLDGVIADKFP 182
            D  G  +G ++ +T   + +D +     +VK  P     NA  DL  GRLDGV  D   
Sbjct: 124 ADLKGKRIGMENGTTHQKFLQDTH----PEVKTVPYDSYQNALIDLKNGRLDGVFGDTAV 179

Query: 183 LHEWMNKNGGDCCKILGDVADTKADAA-------IAVRKDDEALRQRLNTALQQIVANGT 235
           ++EW+  N       L  V +   D A       IAVR D++ L ++LN AL  I ANGT
Sbjct: 180 VNEWLKTNPD-----LATVGEKVTDPAYFGIGLGIAVRPDNQPLLEKLNGALNAIKANGT 234

Query: 236 YQKIASKYF 244
           Y+ +  K+F
Sbjct: 235 YKALNDKWF 243