Pairwise Alignments

Query, 250 a.a., L-lysine and D-lysine ABC transporter, substrate-binding component (from data) from Pseudomonas putida KT2440

Subject, 257 a.a., ABC transporter, substrate binding protein (amino acid) from Agrobacterium fabrum C58

 Score =  227 bits (578), Expect = 2e-64
 Identities = 123/246 (50%), Positives = 154/246 (62%), Gaps = 7/246 (2%)

Query: 8   LGACALLLAGAASAETLRFATEGAYPPFNYVDADNKLHGFDVDITHALCEQMKVECTLVA 67
           + A +LL   A + + +   TEGAYPPFN ++AD  L GFD+DI  ALCEQMK ECT V 
Sbjct: 13  IAAISLLSGAALAQDKIVIGTEGAYPPFNNLEADGTLTGFDIDIAKALCEQMKAECTFVT 72

Query: 68  QDWEGIIPALMARKYDAIVASMIDTEERRKKIAFTDHYYRTPLTVAVAKDSKIDSAQTDF 127
            DW+GIIPAL A+K+DAI+ASM  T ER +K+ F+  YY TP  +AV KDS I S   D 
Sbjct: 73  NDWDGIIPALQAKKFDAIIASMSITPERLQKVDFSKKYYNTPPAIAVPKDSPIKSID-DL 131

Query: 128 VGYTVGAQSSSTQAIYAEDVYGKAGADVKLYPTMDEANADLAAGRLDGVIADKFPLHEWM 187
            G ++GAQ S+T + YAE  +    ADVK+YPT DE   D+A GR+D VI D   L EW+
Sbjct: 132 KGKSLGAQGSTTHSNYAEKHF--PDADVKMYPTADEYKLDIANGRIDAVIDDIVVLSEWL 189

Query: 188 NKNGGDCCKILG----DVADTKADAAIAVRKDDEALRQRLNTALQQIVANGTYQKIASKY 243
             + G CCKIL     D       A IAVRK D AL  +   A+  I A+G YQ+I  KY
Sbjct: 190 KTDAGKCCKILTPLKVDPEINGNGAGIAVRKGDTALADKFTAAIAGIRASGKYQEINKKY 249

Query: 244 FAFDIY 249
           F FD+Y
Sbjct: 250 FDFDVY 255